Pairwise Alignments

Query, 393 a.a., Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 372 a.a., branched chain amino acid ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score =  115 bits (287), Expect = 3e-30
 Identities = 93/329 (28%), Positives = 152/329 (46%), Gaps = 13/329 (3%)

Query: 19  ALLATPLAAL-AAAATGEPVWFGVSGPLTGQNAQYGAQWKAGFDLALEHINAQGGIQGRP 77
           ALLA  +A + +  A  E +   V G ++G  AQYG Q   G + A+  INA+GGI+G  
Sbjct: 12  ALLAGCIALIMSGTAMAEDIKVAVVGAMSGPVAQYGDQEFTGAEQAIADINAKGGIKGNK 71

Query: 78  LAYNFEDSQSDPRQSVAIAQKLVNDKRVLIELGDFSSPASMAASPIYQRAGLVQLGFTNS 137
           L     D   DP+Q+VA+A K++ND  +   +G   S ++  AS IY+  G++ +    +
Sbjct: 72  LQMVKYDDACDPKQAVAVANKVIND-GIKYVIGHLCSSSTQPASDIYEDEGVLMITPAAT 130

Query: 138 HPDFT-KGGDYIWSPSISQADAQPLLAELAVKTLGFKRIAVLYLNTDWGRTSKDVLVKAA 196
            P+ T +G   I   +   +D  P  A+  ++ +  +RIA+++    +G      +    
Sbjct: 131 APELTARGYHLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARAVQDNL 190

Query: 197 QERGAQVAIAEGYQPDEKDFRSTLVRVRDANPDGLVLISYYPDGALIAGQVRSVGLRQPI 256
           ++ GA V   +G    EKDF + + R++  N D +    Y+P+   I  Q R+ GL+   
Sbjct: 191 KKGGANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQSRAAGLKTQF 250

Query: 257 AAVGSVYSPKFIELGGASVNG-IFTNTAFYPDEP-RAEVQDFVKSFRAKYNKEPDAFNAY 314
                V +     + GAS  G + T    Y   P    + D +K+      K+ D   A+
Sbjct: 251 MGPEGVANVSLSNIAGASAEGMLVTKPKNYDQVPANKPIVDAIKA------KKQDPSGAF 304

Query: 315 AYDAVVYAAAALRQAGANADRKAVRDAFY 343
            +    YAA    QAG N        A Y
Sbjct: 305 VW--TTYAALQSLQAGLNQSEDPAEIAKY 331