Pairwise Alignments

Query, 204 a.a., Threonine efflux protein from Variovorax sp. SCN45

Subject, 207 a.a., transporter, LysE family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 70.9 bits (172), Expect = 2e-17
 Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 20/206 (9%)

Query: 10  FVAAIVLFLLIPGPGNLALITSTSKGGIRGGLAATTGVILGDQCLMWAAVAGVSAVLAAY 69
           F+       + PG      +T     G+R  L    G ++G   +  AAV GV++++  Y
Sbjct: 10  FIPTFFFVAITPGMCMTLAMTLGMSIGVRRTLWMMLGELIGVALVATAAVMGVASIMLNY 69

Query: 70  PAAFKAVQWLGAVYLGWLGLKMLLAKPGSAPILN-------IKPSHFMRQAFTITLLNPK 122
           P  F+  +W+G +YLG++G++M  A+ G   IL+       +     + Q F   + NPK
Sbjct: 70  PEVFQIFKWVGGLYLGYIGVQMWRAR-GKMAILSDDKTNPRVSNLTLISQGFITAIANPK 128

Query: 123 AIVFYMAFFPLFVDPARH---QGLITFGAMAVTIAALTFLYGLTSTLLTHFLA--ERIRA 177
              F ++  P F++  R    Q L     + VT       Y      L  FL+  + IR 
Sbjct: 129 GWAFMVSLLPPFINAEREVAPQLLALLSIIMVTEFTSMLAYASGGKSLRIFLSRGDNIR- 187

Query: 178 NPRISGTLEKLAGTFLIAFGVKLAIS 203
                  L ++AG+ +I  G+ LAIS
Sbjct: 188 ------WLNRIAGSLMIGVGIWLAIS 207