Pairwise Alignments

Query, 464 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 447 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  119 bits (298), Expect = 2e-31
 Identities = 98/328 (29%), Positives = 157/328 (47%), Gaps = 15/328 (4%)

Query: 126 FSDITYEGSALRAVVLEHDAEPDISMPYR-VIIAQTTLSRTALVRQLLGYALAPQILLLV 184
           FSDIT  G + R   L   + PD     + V++A+    R   + ++      PQ++L++
Sbjct: 110 FSDITLNGESWRYFQL---SLPDQEKGKQYVLVAEKQSIRDEAINEIALSTALPQLILIL 166

Query: 185 LLAIWLWYGIRSDLRPLADLQRALDRRDVHDLSPVQVAQTSRELQRLGNAVNSLFERLGQ 244
            L + L   I    +P+  L+ A+  R +H L  + V + + EL  L   +N L   L Q
Sbjct: 167 CLIVVLVVLIERSFQPIQALKAAIALRSIHKLDRIYVEKPTVELLPLVETLNQLLNELEQ 226

Query: 245 SVQAQREFVGNVAHELRTPLAGIRALAEYGLAQHDTNVWREQLERVSERQGRASHLIDQL 304
           + Q ++ F    AHEL+TPL  +R  AE  L   +    ++ LER+ +   R   LI QL
Sbjct: 227 AWQREKRFTRMAAHELKTPLTVLRVNAENALRSTNQEQLKQDLERIFKGIERTDRLIHQL 286

Query: 305 LALALAEEARTELKRVPVRLDVLAEQTVLRHLARADARGVDLGARGLDDGVVVYANEALV 364
           L LA  E  +T L++ PV L  + +Q +      A  +   L   G  +   ++ +E L+
Sbjct: 287 LMLAKVESTQT-LRKQPVELANVIKQVIADLAPIAFKQDQQLSFHG--ESSRLWGDELLL 343

Query: 365 EGILDNLIDNALRYGGRT--ITVELAGR----TLSVIDDGPGIPIEARRDLMQRWAQGPA 418
             +  NL+DNA+RY G +  I VEL+       + V D G  I    R  +   + +  A
Sbjct: 344 GILFKNLLDNAIRYSGHSSQIAVELSDHDGEIEVRVSDTGAAIDDLTREKMFDNFYR--A 401

Query: 419 GEKLGQGSGLGLSIVSRYAELLGAELRL 446
             + G G+GLG+SI    A L G ++ L
Sbjct: 402 NSQKGDGAGLGMSICRDIAALHGGQVLL 429