Pairwise Alignments

Query, 800 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Variovorax sp. SCN45

Subject, 740 a.a., Penicillin-binding protein 1A from Synechococcus elongatus PCC 7942

 Score =  152 bits (385), Expect = 5e-41
 Identities = 105/297 (35%), Positives = 166/297 (55%), Gaps = 11/297 (3%)

Query: 41  VVLVAAIVAVVAIYPKLPD--VSALSDYRPKLPLRVYSAEGQMIGEFGEERR-NLTPFAN 97
           V +  A+V  +AI   L    VS  S    + P+  Y+A+G+ +          L   ++
Sbjct: 153 VTITTAVVGAIAIGITLEASRVSVRSLGTVQGPIAAYAADGEPLQTLRSSSHVELPALSD 212

Query: 98  IPKVMKDAVLAVEDARFYDHGGVDYKGFLRAAVASLKGGR-KQGASTITMQVARNV---Y 153
              V+  A+LA ED+RFY H G+D  G  RA + + + G  ++GAST+T Q+AR++   Y
Sbjct: 213 FSPVLPKALLASEDSRFYWHLGIDPYGTARAILTNFRSGEVREGASTLTQQIARSLFSDY 272

Query: 154 LSSERTMSRKTYEILLALRLEQQLTKDQILEIYLNQIYLGNRAYGFAAAAETYFGKPLQD 213
           +  E ++ RK  E +LAL+LE   +KD++L  YLN++YLG   YGF  AA+ YFGK  +D
Sbjct: 273 VGREDSIGRKVREAILALKLEFFYSKDELLRTYLNRVYLGV-GYGFEDAAQIYFGKSARD 331

Query: 214 VTIAEAAMLAGLPKAPGANNPVANPRRARARQLYVIDRMQETGFITAEQAAAAKKEELHL 273
           ++ +EAA+L GL  +P   +P  N   A+ ++  VI+RMQ  G I+ E+A  A++  + +
Sbjct: 332 LSTSEAALLVGLLPSPNGFSPCTNLAAAQRQKNGVIERMQSLGLISEEEARTARRSPVTI 391

Query: 274 RDAA--DPNRLHAEYVAETVRQMMYAQYGDSIYTSG-LKVYTSLVAADQAAAYKSLR 327
           +  A    +R+ A Y    V + +    GD++   G   V TSL  A Q AA +SL+
Sbjct: 392 KPEACQTSSRVTAPYYYGAVVEELAQLVGDTVVEEGNFAVETSLNPAMQTAAEQSLQ 448



 Score =  142 bits (357), Expect = 9e-38
 Identities = 101/303 (33%), Positives = 146/303 (48%), Gaps = 37/303 (12%)

Query: 444 EAAFIGMDPRSGAIKALVGGFDFGKNKFNHVTQAWRQPGSSFKPFIYSAALEKGFTPATV 503
           + A + +D R+G I+ALVGG D+  ++F+  TQA+RQPGS+FK F Y+AALE+G +    
Sbjct: 459 QGAIVTIDSRNGEIRALVGGVDYQASQFDRATQAYRQPGSTFKVFAYAAALEQGISAGRP 518

Query: 504 VNDAPLYFDPSANGGQPWEPKNFEG--TYEGPMPLRTALMKSKNLVTLRVLQSIGAPYAQ 561
            + +PL           W+ + F G     G + L  AL +S+N V LRV + +G     
Sbjct: 519 YDCSPLV----------WQGQQFRGCERSSGSIDLARALAQSENAVALRVAREVGLDAVV 568

Query: 562 DWVTKFGFDKDKQPANLPMGLGAGSVTPMQMAVGYSVFANGGYRVNPYLVTKVTDMKGKV 621
               KFG   D QP    + LG   VT ++M   ++  AN G    P+ + ++ D     
Sbjct: 569 QMARKFGIKADLQPVP-GLVLGQSEVTLLEMTSAFAAIANEGRWNPPHAIRRIYDSSRCT 627

Query: 622 LMETEP------PVLDESRR---AIPQRNAFIMSSLLQSVVRNGTGFKA---YQALKRDD 669
             E          V  + RR    I    A  ++++LQ  V +GTG  A   Y A     
Sbjct: 628 TAEQRRSCTLTFDVQQQPRRDRVVISAATAATLTAMLQQAVSSGTGGAAAIGYGAA---- 683

Query: 670 LYGKTGTTNDSFDTWFAGFQPT--MVGVAWVGYDTPRQLGVRGETGGSLSLPIWTGYMQT 727
             GKTGTTND  D WF GF P+  +V   W+G D  +  G       SL+  +W  YM  
Sbjct: 684 --GKTGTTNDGVDLWFVGFVPSRHLVTGVWLGNDDNQPTG----NSSSLAAQLWGDYMAR 737

Query: 728 ALQ 730
            L+
Sbjct: 738 ILR 740