Pairwise Alignments

Query, 800 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Variovorax sp. SCN45

Subject, 861 a.a., 1A family penicillin-binding protein (RefSeq) from Shewanella loihica PV-4

 Score =  491 bits (1264), Expect = e-143
 Identities = 293/805 (36%), Positives = 437/805 (54%), Gaps = 91/805 (11%)

Query: 33  VVVGSGALVVLVAAIVAVVAIYPKLPDVSALSDYRPKLPLRVYSAEGQMIGEFGEERRNL 92
           + + S AL+ + A   A   + P LPDV+ L   + + PLR+YSA+G++I +FGE+RR  
Sbjct: 9   IALFSLALLGIGAIAAAYFYVLPDLPDVTTLKTVKLQTPLRIYSADGKLISQFGEKRRIP 68

Query: 93  TPFANIPKVMKDAVLAVEDARFYDHGGVDYKGFLRAAVASLKGGRK-QGASTITMQVARN 151
             +  +P+ + +AVL  EDARF++H G+D  G +RAAV     G+K QGASTIT QVAR 
Sbjct: 69  VEYEQVPQQLINAVLDTEDARFFEHKGIDPIGIIRAAVILATTGKKSQGASTITQQVARG 128

Query: 152 VYLSSERTMSRKTYEILLALRLEQQLTKDQILEIYLNQIYLGNRAYGFAAAAETYFGKPL 211
            +LS E+T  RK  EI LAL++EQ L+K +IL +YLN+ +LGNRAYG  AAA+ Y+GK L
Sbjct: 129 FFLSREKTYIRKIKEIFLALKIEQALSKKEILTLYLNRSFLGNRAYGVGAAAQVYYGKEL 188

Query: 212 QDVTIAEAAMLAGLPKAPGANNPVANPRRARARQLYVIDRMQETGFITAEQAAAAKKEEL 271
           +++T+ E AM+AGLP+AP A NP+ NP RA  R+ +V+ RM E   IT ++   A +  +
Sbjct: 189 EELTLPEMAMIAGLPQAPSAANPIRNPARAMNRRNWVLSRMLEKENITPDEYQEAIRAPI 248

Query: 272 HLRDAADPNRLHAEYVAETVRQMMYAQYG-DSIYTSGLKVYTSLVAADQAAAYKSLRKGI 330
             +       L+A Y++E  R  +  + G +  YT G  VYT++ +  Q  A ++LR  +
Sbjct: 249 TAKYHGAEVELYAPYISEMARDYLVEKLGEEEAYTGGYNVYTTVDSRLQMLAQEALRNNV 308

Query: 331 MDYERRQAYRGPEKFV-DLPTEQKEVDEAVDDALAEHPDNGDVIAAVVLDANPKEISAVR 389
             Y+ R  YRG  K + D     K  +  +   L +      +  A VL+   + +  + 
Sbjct: 309 YAYDERHGYRGATKVLWDAEGTAKLDETQIVTQLKQTQGFQGLEPAAVLEVAEQSVKVIN 368

Query: 390 ANGETIQITGDGLKPAQSGLAAKAPPNIKIRRGAVIRVA-----KTPKNTWEITQLPEVE 444
           A GET+ +  +GLK A+  ++ K         G +++       +   N W+++Q+PEV 
Sbjct: 369 AKGETLTLEWEGLKWARKFISNKRQGKAPKTAGEILKAGEQVWIRNNGNIWQLSQIPEVA 428

Query: 445 AAFIGMDPRSGAIKALVGGFDFGKNKFNHVTQAWRQPGSSFKPFIYSAALEKGFTPATVV 504
           +A + +DP+ GAI+ LVGG+ F  +++N VTQA RQ GS+ KPFIY+ ALEKG+T AT++
Sbjct: 429 SAIVSLDPKDGAIRTLVGGYSFHTSQYNRVTQAKRQLGSNIKPFIYTGALEKGYTLATLI 488

Query: 505 NDAPLYFDPSANGGQPWEPKNFEGTYEGPMPLRTALMKSKNLVTLRVLQSIGAPYAQDWV 564
           N+AP+  +     G  W PKN    Y GP  LR  L +S N++++R ++  G   A D +
Sbjct: 489 NNAPIN-NADIRQGTAWRPKNSPDKYTGPTRLRVGLAQSINVMSVRAMRYTGLESAIDTL 547

Query: 565 TKFGFDKDKQPANLPMGLGAGSVTPMQMAVGYSVFANGGYRVNPYLVTKVTDMKGKVLME 624
            KFGFD+D  P N  + LG+ SVTP+Q+   +SVFANGGYRV PY +  + +   + + E
Sbjct: 548 VKFGFDRDDLPQNESLALGSPSVTPLQVVTAFSVFANGGYRVEPYFIDHIDNAYEQTVEE 607

Query: 625 TEP---------------------------------------------------PVLDES 633
             P                                                   P    +
Sbjct: 608 ASPTLACKPELIQPQTLPTDDPFAAMAQELPKHEVANQEVEGLEVASQEANAEDPSCPST 667

Query: 634 RRAIPQ----RNAFIMSSLLQSVV-----------RNGTGFKAYQALKRDDLYGKTGTTN 678
            R  PQ    + AF+++  L+SV+            NGT ++A + + R D+ GKTGTTN
Sbjct: 668 ARHAPQIISKQTAFLITEALKSVIWGGGDWSKGTGWNGTAWRAARVVNRHDIAGKTGTTN 727

Query: 679 DSFDTWFAGFQPTMVGVAWVGYDTPR-QLG------------VRG-ETGGSLSLPIWTGY 724
           +S DTWF+GF PT+    WVG+D    +LG            + G E G   + P W  +
Sbjct: 728 ESKDTWFSGFTPTLATTVWVGFDDHSIELGRTAWNTNGAKDQISGAEAGAKTAGPGWNEF 787

Query: 725 MQTALQGVPMTQPAEPPGVV--RID 747
           M+ ALQG P      P G+V  RID
Sbjct: 788 MKNALQGTPELPSPPPEGIVSARID 812