Pairwise Alignments

Query, 307 a.a., Nucleoside ABC transporter, permease protein 2 from Variovorax sp. SCN45

Subject, 308 a.a., Nucleoside ABC transporter, permease protein 2 from Pseudomonas fluorescens FW300-N2E2

 Score =  190 bits (482), Expect = 4e-53
 Identities = 117/308 (37%), Positives = 174/308 (56%), Gaps = 10/308 (3%)

Query: 5   LDILANPAFWVAVLRIATPLILGTLGVLLCERAGVLNLGIEGIMVAGAFTGWLAVYAGAP 64
           +D+L+N   + A++R  TPL+L  LG L+CE++GVLNLG EG+M+ GA  G++  +    
Sbjct: 3   IDLLSN--IFYAMVRCGTPLLLVALGELVCEKSGVLNLGQEGMMLFGAVIGFIVAFNSGN 60

Query: 65  LWVGVGVAALTGMVFGLLHAFLTVGLALSQHVSGLGITLLATALSYF--GYRVSFPKVNT 122
           LW+GV +A   GM+   L A + +    +Q  +GL +T+    LS F     V  P    
Sbjct: 61  LWLGVLLAMAAGMLLSALFALVALVFNANQVATGLALTIFGVGLSSFVGAAWVGKPLAGF 120

Query: 123 PPTITPFAPMDWLPVPILNAQTALTLFALLLVPVVGWVLYRTPLGLALRMAGENPQAAES 182
            P   P+     L   +L AQ  L   +  L  +V W++ ++ +GL ++  GENP AA +
Sbjct: 121 EPLAIPYLSDIPLIGRMLFAQDLLVYLSFALFALVAWMIVKSRVGLIIQAVGENPDAASA 180

Query: 183 QGVSVAATRTGAIVAGSALMGMAGSFLTLSAFNAFFFNMVNGRGWICVALVVFASWRPGK 242
            G+ V   RT A++ G A+ G+AG++L+L+    +  NM  GRGWI +ALVVFASWR  +
Sbjct: 181 MGLPVLRVRTLAVLFGGAMAGLAGAYLSLAYTPMWAENMSAGRGWIALALVVFASWRVWR 240

Query: 243 ALLGALLFAFFDALQLRLQQSGDAVLPYQLYLMLPYLLSILALVLVARKA-----SYPQA 297
            LLGA LF     L L  Q  G A+ P  L  MLPY  +I+ LVL++R A       P +
Sbjct: 241 LLLGAYLFGLASILHLVAQGLGLAI-PSSLLAMLPYAATIVVLVLLSRDAVRTRLYAPVS 299

Query: 298 LMKPYRKG 305
           L +P++ G
Sbjct: 300 LGQPWQSG 307