Pairwise Alignments

Query, 307 a.a., Nucleoside ABC transporter, permease protein 2 from Variovorax sp. SCN45

Subject, 306 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  168 bits (426), Expect = 1e-46
 Identities = 109/298 (36%), Positives = 158/298 (53%), Gaps = 8/298 (2%)

Query: 12  AFWVAVLRIATPLILGTLGVLLCERAGVLNLGIEGIMVAGAFTGWLAVYAGAPLWVGVGV 71
           A   +V+  ATPL+L  LG L+ ER+GVLNLG+EG+M+ GA   + A       +VG+  
Sbjct: 6   AILFSVITAATPLVLAALGELVAERSGVLNLGVEGMMIMGAVCAFAATQLSGSPYVGILA 65

Query: 72  AALTGMVFGLLHAFLTVGLALSQHVSGLGITLLATALS-YFGYR-VSFPKVNTPPTITPF 129
               G VF LL  FLT+ L  +Q  +GL +TLL   +S   G   +    +   P   P 
Sbjct: 66  GIAAGAVFSLLFGFLTLTLVANQVATGLALTLLGLGVSGMLGESFLGMQGIKLQPIAIPL 125

Query: 130 APMDWLPVPILNAQTALTLFALLLVPVVGWVLYRTPLGLALRMAGENPQAAESQGVSVAA 189
                +  P+L  Q A+   ++ +V  V   L+R+  GL LR  G++  +A + GV+V  
Sbjct: 126 LSKIPVVGPLLFRQDAIFYASVAIVVGVHLFLFRSRAGLKLRAVGDSHASAHALGVNVIL 185

Query: 190 TRTGAIVAGSALMGMAGSFLTLSAFNAFFFNMVNGRGWICVALVVFASWRPGKALLGALL 249
           TR  A++ G A  G+AG+ L+L     +  NM  GRGWI +ALVVFASWRP + + G  L
Sbjct: 186 TRYLAVLFGGACAGLAGAQLSLVYTPQWVENMSAGRGWIALALVVFASWRPWRVVAGGYL 245

Query: 250 FAFFDALQLRLQQSGDAVLPYQLYLMLPYLLSILALVLVARK-----ASYPQALMKPY 302
           F      QL  Q  G  + P Q    LPYL +I+ L+L++        + P +L KP+
Sbjct: 246 FGAVSISQLHAQAFGIGI-PSQFLTALPYLATIVVLILISHNRRMTLINTPASLGKPF 302