Pairwise Alignments

Query, 307 a.a., Nucleoside ABC transporter, permease protein 2 from Variovorax sp. SCN45

Subject, 306 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  175 bits (444), Expect = 1e-48
 Identities = 113/313 (36%), Positives = 170/313 (54%), Gaps = 36/313 (11%)

Query: 12  AFWVAVLRIATPLILGTLGVLLCERAGVLNLGIEGIMVAGAFTGWLAVYAGAPLWVGVGV 71
           A +   +  ATPLI   LG L+ E++GVLNLG+EG+M+ GA   + AV AG P+ V +  
Sbjct: 6   AIFTGTIIAATPLIFAALGELVVEKSGVLNLGLEGMMLMGAAFAFWAVIAGLPMPVAIAA 65

Query: 72  AALTGMVFGLLHAFLTVGLALSQHVSGLGITLLATALSYF---GY---------RVSFPK 119
            AL G    LL   L +    +Q+ +GL + +  + +S F   G+         RV  P 
Sbjct: 66  GALAGAATSLLFGVLALTFLTNQYAAGLALAIFGSGVSAFLGRGFGSAPIDALKRVHIPF 125

Query: 120 VNTPPTITP----FAPMDWLPVPILNAQTALTLFALLLVPVVGWVLYRTPLGLALRMAGE 175
           ++  P + P    F PM +L         A+ +F L+      W LYRT  GL LR  GE
Sbjct: 126 LSDIPVVGPMFFRFDPMVYL---------AIGMFGLIT-----WFLYRTKGGLILRTIGE 171

Query: 176 NPQAAESQGVSVAATRTGAIVAGSALMGMAGSFLTLSAFNAFFFNMVNGRGWICVALVVF 235
           +P+ + + G  V   R  A++ G  + G+AG++L+++    +  NM  G+GWI +ALVVF
Sbjct: 172 SPETSHAIGYPVIRIRYLAVLFGGLMAGLAGAYLSVAYTPLWVENMTAGKGWISLALVVF 231

Query: 236 ASWRPGKALLGALLFAFFDALQLRLQQSGDAVLPYQLYLMLPYLLSILALVLVARKAS-- 293
           A+WRP + L+GA LF     LQL+ Q  G AV P +L   LPYL +I+ LV++++     
Sbjct: 232 ATWRPLRVLIGAWLFGGMTILQLQGQALGIAV-PSELLSALPYLATIIVLVIISQNRQLL 290

Query: 294 ---YPQALMKPYR 303
              +P +L KP+R
Sbjct: 291 TLHFPASLAKPFR 303