Pairwise Alignments

Query, 307 a.a., Nucleoside ABC transporter, permease protein 2 from Variovorax sp. SCN45

Subject, 310 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  206 bits (524), Expect = 6e-58
 Identities = 122/309 (39%), Positives = 171/309 (55%), Gaps = 5/309 (1%)

Query: 1   MTDLLDILANPAFWVAVLRIATPLILGTLGVLLCERAGVLNLGIEGIMVAGAFTGWLAVY 60
           M D+  +    A   A  R+A PL+  ++G +  ERAGVLN+G+EG+M+AGAF G+ A +
Sbjct: 1   MEDVASLSFLAATIAASWRLAAPLMFASIGEVFSERAGVLNIGLEGVMLAGAFAGFAAAF 60

Query: 61  AGAPLWVGVGVAALTGMVFGLLHAFLTVGLALSQHVSGLGITLLATALSYFGYRVSFPKV 120
               + +GV  A   G++ GLL AF T+ +   Q V G  I LL   L+ F +R  F   
Sbjct: 61  TSGSILLGVAAAVAAGVLVGLLFAFFTITIKADQIVVGAAINLLGLGLTAFLFRAYFSSA 120

Query: 121 NTPPTITPFAPMDWLP-VPILNA----QTALTLFALLLVPVVGWVLYRTPLGLALRMAGE 175
                I     + WL  +P        Q A     L +  +  +VLYRT  GL LR  GE
Sbjct: 121 GKGIEIAKPVDLPWLSDLPFFGEAFFRQNAFVYSTLPVAALAVFVLYRTSFGLTLRAVGE 180

Query: 176 NPQAAESQGVSVAATRTGAIVAGSALMGMAGSFLTLSAFNAFFFNMVNGRGWICVALVVF 235
           +P+A +  G SVA  R GA++  SAL  + G+FLTL+  N F   + +GRG+I +A+VVF
Sbjct: 181 HPKAVDVSGRSVALYRYGAVLICSALAALGGAFLTLAHSNQFVEGISSGRGFIALAVVVF 240

Query: 236 ASWRPGKALLGALLFAFFDALQLRLQQSGDAVLPYQLYLMLPYLLSILALVLVARKASYP 295
           A W P  A + +LLF  F ALQL+LQ      LPYQL+  LPY+++I AL+LV  +   P
Sbjct: 241 ARWSPIGAFIVSLLFGVFYALQLQLQAQPVLFLPYQLFQALPYVMTIAALILVRNRVDTP 300

Query: 296 QALMKPYRK 304
             L   Y+K
Sbjct: 301 SMLGVAYKK 309