Pairwise Alignments

Query, 307 a.a., Nucleoside ABC transporter, permease protein 2 from Variovorax sp. SCN45

Subject, 306 a.a., ABC transporter, permease protein from Phaeobacter inhibens DSM 17395

 Score =  167 bits (424), Expect = 2e-46
 Identities = 116/295 (39%), Positives = 163/295 (55%), Gaps = 9/295 (3%)

Query: 10  NPAFWVAVLRIA-TPLILGTLGVLLCERAGVLNLGIEGIMVAGAFTGWL-AVYAGAPLWV 67
           NP   +A L +A TP+++  +G L+ E++GVLNLG+EG+M+ GA  G+  AV  G+PL +
Sbjct: 7   NPVLLIASLMVAATPILIAAIGELVVEKSGVLNLGVEGMMITGAIAGFATAVETGSPL-L 65

Query: 68  GVGVAALTGMVFGLLHAFLTVGLALSQHVSGLGITLLATALSYFGYRVSFPKVNTPPTIT 127
           G   AA  G    +L  FLT     +Q  SGL +TL    LS    + S+  V  P    
Sbjct: 66  GFFAAAFAGAALSVLFGFLTQFAKANQVASGLALTLFGLGLSALMGQ-SYVGVKPPQMGD 124

Query: 128 PFAP-MDWLPV--PILNAQTALTLFALLLVPVVGWVLYRTPLGLALRMAGENPQAAESQG 184
              P +  LPV  PIL     +  F + L   V  +L  +  GL LR  GEN  AA + G
Sbjct: 125 IHIPVLSDLPVVGPILFGHDIILYFGIALTAAVWALLKFSRAGLILRAVGENHDAAHALG 184

Query: 185 VSVAATRTGAIVAGSALMGMAGSFLTLSAFNAFFFNMVNGRGWICVALVVFASWRPGKAL 244
             V   R  AI+ G A  G+ G++++L     +   M  G GWI +ALVVFASW+P +AL
Sbjct: 185 YKVIRIRLMAILFGGACAGVGGAYISLIRVPQWTEGMTAGVGWIALALVVFASWKPWRAL 244

Query: 245 LGALLFAFFDALQLRLQQSGDAVLPYQLYLMLPYLLSILALVLV-ARKASYPQAL 298
           LGA LF     +QL LQ +G A+ P +   M PY+++I+ LV++ A K+S P AL
Sbjct: 245 LGAYLFGGVTVVQLNLQAAGVAI-PVEYLAMSPYVITIVVLVILSADKSSAPAAL 298