Pairwise Alignments

Query, 307 a.a., Nucleoside ABC transporter, permease protein 2 from Variovorax sp. SCN45

Subject, 293 a.a., branched-chain amino acid ABC-type transport system, permease component from Dechlorosoma suillum PS

 Score = 65.5 bits (158), Expect = 1e-15
 Identities = 73/274 (26%), Positives = 116/274 (42%), Gaps = 26/274 (9%)

Query: 16  AVLRIATPLILGTLGVLLCERAGVLNLGIEGIMVAGAFTGWLAV-YAGAPLWVGVGVAAL 74
           A+  +   L+ G L V+        NL    + + G++     V +  APLWV +  A +
Sbjct: 17  ALFALGFTLVFGVLAVI--------NLSHGAVFMVGSYAALAMVSHLNAPLWVAMLGAMV 68

Query: 75  TGMVFGLLHAFLTVGLALSQHVS---------GLGITLLATALSYFGYRVSFPKVNTPPT 125
                GLL   L +    +++           G+GI L + A   FG  V    +  P  
Sbjct: 69  VSGTIGLLVDVLVLKPLRARNAPHLIPMIATIGVGIMLTSAAQGLFGAEV----LRFPED 124

Query: 126 ITPFAPMDWLPVPILNAQTALTLFALLLVPVVGWVLYRTPLGLALRMAGENPQAAESQGV 185
           + P        V +   + A+   A LL+ V+  +L RT LG ALR   E+P+AA   G+
Sbjct: 125 VMPAGEFMVGDVHVRALEIAIVAIAFLLMAVLFTILKRTQLGRALRAIAESPKAAYLLGI 184

Query: 186 SVAATRTGAIVAGSALMGMAGSFLTLSAFNAFFFNMVNGRGWICVALVVFASWRPGK-AL 244
           +V           +AL G+AG  + L+ FNA    M        +A+++       + AL
Sbjct: 185 NVEGLFHITSFVAAALGGIAGVLIGLN-FNAITPFMGQPMLHKGIAVIILGGMGDIRGAL 243

Query: 245 LGALLFAFFDALQLRL--QQSGDAVLPYQLYLML 276
           +G L   F + +       Q GDAV    L+L+L
Sbjct: 244 IGGLFLGFAEVISKAYLSSQMGDAVAFGLLFLIL 277