Pairwise Alignments

Query, 355 a.a., Nucleoside ABC transporter, permease protein 1 from Variovorax sp. SCN45

Subject, 349 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  347 bits (889), Expect = e-100
 Identities = 187/352 (53%), Positives = 241/352 (68%), Gaps = 5/352 (1%)

Query: 2   MRLEKRHQTSRAALVLAPIGAVVFTMIVSALLVLWAGAPVGRTYALLLQGGFGSVFAWSE 61
           MR E+R   S A ++  P+ A++  + ++ LL+  AGAPV   Y  +L G FGS  + +E
Sbjct: 1   MRFERREHRSFALVIATPVLAILCALALAGLLIAIAGAPVMEAYWRILVGAFGSRLSATE 60

Query: 62  TLTRAIPLILTGLAATVAFKARLFNIGSEGQLYAGALAAVAVGG-MHGGTGFELSPWLLF 120
           TLTRA PLILTGLAA VAF+A+L+NIG+EGQ Y GA+A  A    + GG    L P L  
Sbjct: 61  TLTRASPLILTGLAAAVAFRAKLWNIGAEGQFYLGAIAVAAASSHLFGG----LPPPLQV 116

Query: 121 PLMMLAAAVAGALMLLGPALMKNKLGVDEVVTTLLINFIVLLGVSALLDGPMKDPTAMGW 180
           PL+++A A AG ++LL P  ++ +  VDEVVTTLL+NF+ +L VS L+DGP+KDP   GW
Sbjct: 117 PLLLVAGAAAGIVLLLVPLWLRLRFSVDEVVTTLLLNFVAVLFVSMLIDGPLKDPMGFGW 176

Query: 181 PQSVSLQSDLELGKLVAQTRVHTGLLWAVSLAVMVWAVFKYTVLGFDIRAVGANARAAAF 240
           PQS  +     L KL A++R+H GL+ A+  AV V  V   TV G   RA G N   A F
Sbjct: 177 PQSQPVADAAVLPKLFARSRLHVGLMIALVFAVAVHLVQSRTVFGMQSRAAGLNPAGAVF 236

Query: 241 AGVPVTRTVVMVALLSGALAGLAGAIEVAGRTSYVTLDMSPGYGYTGIVIAMLAGLHPLG 300
           AGVP+ RT+V VA +SG LAGLAGAIEV G   YVT D+SPGYGY+GIV+AMLA LHPLG
Sbjct: 237 AGVPLGRTLVTVACISGGLAGLAGAIEVMGVQGYVTTDLSPGYGYSGIVVAMLANLHPLG 296

Query: 301 VIAAGVFVAGVLVGADTMSRAVGVPTYIADVIVAASLIAVLVATLLTQYRVR 352
           V+ A +F A + VGAD MSR++G+P+YIADV VA SLI++L     TQYR+R
Sbjct: 297 VVLAALFTAVMFVGADGMSRSMGIPSYIADVTVALSLISMLTGVFFTQYRIR 348