Pairwise Alignments

Query, 355 a.a., Nucleoside ABC transporter, permease protein 1 from Variovorax sp. SCN45

Subject, 310 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 84.0 bits (206), Expect = 5e-21
 Identities = 72/285 (25%), Positives = 131/285 (45%), Gaps = 25/285 (8%)

Query: 66  AIPLILTGLAATVAFKARLFNIGSEGQLYAGALAAVAVGGMHGGTGFELSPWLLFPLMML 125
           A PL+ + +   V  +A ++NI  EG +  GA+ A  +    G      SPWL   + +L
Sbjct: 21  ATPLLFSAMGELVTQRAGIWNISVEGTMLLGAVVAYVIASSTG------SPWLALFVAVL 74

Query: 126 AAAVAGALMLLGPALMKNKLGVDEVVTTLLINFIVLLGVSALLDGPMKDPTAMGWPQSVS 185
           A A+   ++     ++K++  +  +   LL + + L      + G  +DP      ++V 
Sbjct: 75  ACALLSVILSFVTIVLKSEQFIAGLALNLLASGLTLFWFQTYIIG--RDPPKFAGFEAVE 132

Query: 186 LQ--SDLE-LGKLVAQTRVHTGLLWAVSLAVMVWAVFKYTVLGFDIRAVGANARAAAFAG 242
           +Q  SD+  LG ++   RV T + + + LA  VW     T  G ++R VG N +A    G
Sbjct: 133 IQYLSDIPVLGTVLFSQRVLTYVSFLLPLA--VWFFLYRTRYGLEVRCVGENPKALDVKG 190

Query: 243 VPVTRTVVMVALLSGALAGLAGAIEVAGRTSYVTLDMSPGYGYTGIVIAMLAG-LHPLGV 301
           + V     +  +    ++G  GA  + G +     D+  G G+  +V+A++AG   P  V
Sbjct: 191 LSVGSRRCLAIMFGSVMSGFGGAFLMLGYSDRFVPDLIAGRGWL-VVVAIIAGNWMPFRV 249

Query: 302 IAAGVFVAGVLVGADTMSRAVGVPT---------YIADVIVAASL 337
           + A +F+  +L      ++ VGV           Y+A +++ A L
Sbjct: 250 VGA-IFIFALLEAVGIHAQVVGVSVPHHVFLVLPYVASLVLLAGL 293