Pairwise Alignments

Query, 316 a.a., Inner membrane protein YbhQ from Variovorax sp. SCN45

Subject, 847 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  111 bits (278), Expect = 5e-29
 Identities = 89/288 (30%), Positives = 132/288 (45%), Gaps = 6/288 (2%)

Query: 25  ALIAWLLVRQARTIDWDDVLDAIRALPATTLLAAGAMAACSFVLYSTYDLLGRHLTRHRL 84
           AL    +      + +DDV+ A+      ++  A      SF+  + YD+        +L
Sbjct: 40  ALFGAAIFHLTAEVRYDDVVSALADTSRRSVATAILFTGLSFLALTFYDVSALDYIERKL 99

Query: 85  GTGTVMGVTFISYAFN--LNLGSLVGGVAFRYRLYSRLGLGNETITRVLGFSMFTNWIGY 142
               V      +YA       G L GG A RYR YSRLGL  E I R++ F      +G 
Sbjct: 100 PYPAVALTAACAYAVGNTAGFGPLSGG-AIRYRSYSRLGLKPEEIARLIAFVTLAFGLGL 158

Query: 143 LLVAGVAFCFWPLDLPPGWKIGNDGLRMLGAVLLMLAFAYVLLCAFVRGRVWRVRGHAFK 202
            +V  ++       + P    G D   +    + +LA   V+L A   GR  R+     +
Sbjct: 159 AVVTCLSLLAVGEYVAP--LTGIDAAWLRAIAVFVLAGLLVVLIAARSGREVRIGRLVLR 216

Query: 203 TPGLAMALLQLAMSCANWSLIGGVIWFLLQ-GAVGYPHVLAVLLVAAVAGVVTHVPAGLG 261
            P       Q  ++  + +    V++ LL  G VG+P  LA+  VA   GV++HVPAGLG
Sbjct: 217 LPDSQTCSRQFLVTALDLAASATVLYVLLPAGTVGWPAFLAIYAVAVGLGVLSHVPAGLG 276

Query: 262 VLEAVFVALLAHQVPEATLLGALLAYRGLYYLLPLTVATLGYLVTEVR 309
           V EAV VA L        +LGAL+ YR +Y+LLPL +A +  +  E+R
Sbjct: 277 VFEAVIVASLGRAAGVDAVLGALVLYRVIYHLLPLLIAIVVMIGIELR 324