Pairwise Alignments

Query, 533 a.a., Nucleoside ABC transporter, ATP-binding protein from Variovorax sp. SCN45

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  248 bits (634), Expect = 3e-70
 Identities = 169/538 (31%), Positives = 268/538 (49%), Gaps = 55/538 (10%)

Query: 1   MNPLVLRLAGITKRFGSLVANDAISLDLQAGEVLALLGENGAGKSTLMSILFGHYVADEG 60
           M   +L L+ I K F  + A D  SL++  G V+AL+GENGAGKSTLM +L G Y  D G
Sbjct: 1   MTQAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAG 60

Query: 61  AIEVFGAPLPPGNPKAALAAGVGMVHQHFTLADNLSVLDNVMMGTEP-------LWRPVS 113
           +IE  G P+    P+ +  AG+ ++HQ   L   L++ +N+ +G E        LW  + 
Sbjct: 61  SIEYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMH 120

Query: 114 RRAAARARLLDVAQRFGLPVQPDAKIGSLSVGERQRVEILKALYRGARILILDEPTAVLT 173
           R+A      L+V             +G LS+GE+Q VEI KAL   ++++I+DEPT  LT
Sbjct: 121 RKADQLLARLNVKH------SAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALT 174

Query: 174 PQESEALFATLAQMVAQGLSVIFISHKLGEVLRVSHRVAVLRGGKLVAEARTADTTQAQL 233
             E+E+LF  + ++  QG  +++ISH+L E+  +   + VLR GK + E R  DT +  L
Sbjct: 175 DTETESLFNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGL 234

Query: 234 ALWMVGHAVEAPKRRPAKSVGDAVCVLDHVSTAAGKDGGQDRLREVSLTLRAGEITAIAG 293
              MVG  +E    R A   GD    +  + T +G       + +VS TL+ GEI  ++G
Sbjct: 235 IEMMVGRKLEEQYPRIAAQQGDISLEVIGL-TGSG-------VHDVSFTLKKGEILGVSG 286

Query: 294 VSGNGQVALAELLCGTRRASSGSAQLMGRAL-PPSPARLVQRGVARIPEDRHAVGVVGDL 352
           + G G+  L +++ G   +  G   L GR + P SP   +  G+A I EDR   G+V  L
Sbjct: 287 LMGAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGL 346

Query: 353 PVWENAVSERLRSPVFSRWSFIVKRAAARLHARRIEKAFD-VRGAGLMAPAR-----SLS 406
            V EN     L           + +     HA  +    D +R   +  P+R     +LS
Sbjct: 347 SVKENMSLCALDQ---------LSKGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLS 397

Query: 407 GGNMQKLILGRALLSPEQPEAAKGDDNKKYPNRAPRLIVAHQPTWGLDIGAVAYVQQQLI 466
           GGN QK+ + + L++                   P++++  +PT G+D+GA   + Q + 
Sbjct: 398 GGNQQKVAIAKGLMT------------------KPKVLILDEPTRGVDVGAKKEIYQLIN 439

Query: 467 AARDAGAAVLVISDDLDEVLALGDRVAVMHGGHLGEARPATAWTREAIGLAMAGATAA 524
             +  G +++++S ++ EVL + DR+ VMH G +     A+   +E +     G   A
Sbjct: 440 QFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMACAVGRNPA 497