Pairwise Alignments

Query, 533 a.a., Nucleoside ABC transporter, ATP-binding protein from Variovorax sp. SCN45

Subject, 501 a.a., ribose ABC transporter ATP-binding protein RbsA from Klebsiella michiganensis M5al

 Score =  250 bits (638), Expect = 1e-70
 Identities = 162/524 (30%), Positives = 262/524 (50%), Gaps = 42/524 (8%)

Query: 5   VLRLAGITKRFGSLVANDAISLDLQAGEVLALLGENGAGKSTLMSILFGHYVADEGAIEV 64
           +L+L GI K F  + A    SL++  G V+AL+GENGAGKST+M +L G Y  D G++  
Sbjct: 4   LLQLKGIDKAFPGVKALSGASLNVYPGRVMALVGENGAGKSTMMKVLTGIYARDAGSLLW 63

Query: 65  FGAPLPPGNPKAALAAGVGMVHQHFTLADNLSVLDNVMMGTEPL-------WRPVSRRAA 117
            G       PK++  AG+G++HQ   L   L++ +N+ +G E +       W+ +   A 
Sbjct: 64  LGKETTFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYAEAD 123

Query: 118 ARARLLDVAQRFGLPVQPDAKIGSLSVGERQRVEILKALYRGARILILDEPTAVLTPQES 177
                  +  +  L       +G LS+G++Q VEI K L   ++++I+DEPT  LT  E+
Sbjct: 124 K------LLAKLNLRFNSQKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTET 177

Query: 178 EALFATLAQMVAQGLSVIFISHKLGEVLRVSHRVAVLRGGKLVAEARTADTTQAQLALWM 237
           E+LF  + ++ +QG  +++ISH++ E+  +   V V R G+ +AE   A   +  L   M
Sbjct: 178 ESLFRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLDEDLLIEMM 237

Query: 238 VGHAVEAPKRRPAKSVGDAVCVLDHVSTAAGKDGGQDRLREVSLTLRAGEITAIAGVSGN 297
           VG  +E    R  K+ G     +D++  +         +  +S  LR GEI  +AG+ G 
Sbjct: 238 VGRKLEDQYPRLDKAPGAVRLKVDNLCGSG--------VENISFILRQGEILGVAGLMGA 289

Query: 298 GQVALAELLCGTRRASSGSAQLMGR-ALPPSPARLVQRGVARIPEDRHAVGVVGDLPVWE 356
           G+  L ++L G    SSGS  L GR  +  SP   +  G+  I EDR   G+V  + V E
Sbjct: 290 GRTELMKVLYGALPRSSGSVTLDGREVVARSPQDGLANGIVYISEDRKRDGLVLGMSVKE 349

Query: 357 NAVSERLRSPVFSRWSFIVKRAAARLHARRIEKAFDVRGAGLMAPARSLSGGNMQKLILG 416
           N     LR   FSR    +K    +       + F+V+   +      LSGGN QK+ + 
Sbjct: 350 NMSLTALR--YFSRGGGSLKHKDEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIA 407

Query: 417 RALLSPEQPEAAKGDDNKKYPNRAPRLIVAHQPTWGLDIGAVAYVQQQLIAARDAGAAVL 476
           R L++                   P++++  +PT G+D+GA   + Q +   +  G +++
Sbjct: 408 RGLMT------------------RPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSII 449

Query: 477 VISDDLDEVLALGDRVAVMHGGHLGEARPATAWTREAIGLAMAG 520
           ++S ++ EVL + DR+ VMH GHLG        T+E +  A  G
Sbjct: 450 LVSSEMPEVLGMSDRIMVMHEGHLGGEFTREQATQEVLMAAAVG 493