Pairwise Alignments

Query, 775 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Variovorax sp. SCN45

Subject, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

 Score =  203 bits (517), Expect = 2e-56
 Identities = 165/547 (30%), Positives = 253/547 (46%), Gaps = 38/547 (6%)

Query: 242 RGGNLLLVGEPGVGKSVVILEAIRKAHRLTAARDAPPTFWRS-----HAERLVGRAKYLG 296
           R  N LLVGE GVGK+ +   A   A R+    + P    RS         L+   KY G
Sbjct: 209 RKNNPLLVGEAGVGKTAI---AEGLAWRIVEG-NVPEVIQRSVIYSLDIGSLLAGTKYRG 264

Query: 297 EWQALCDQTVEWLDMS-NGLLWVTDFVNLLQVGGESPEESMAAYLL-PALRRGTLRLVGE 354
           +++      ++ L+   + +L++ +   ++  G  S  +  AA L+ P L  G LR +G 
Sbjct: 265 DFEKRFKSILKQLEKEKDAILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKLRCIGS 324

Query: 355 ANPSELEIARQRLPGFIDCFETLRLPEMDSVRARRVLDLFAGHAKNTLSIEIERPALDTG 414
               E     ++       F+ + + E       ++L       +    +     AL   
Sbjct: 325 TTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTKILMGLKTKYEAHHDVRYTNKALRAA 384

Query: 415 YRLLGRYVRYDSFPGKAVRFFGDCVREA----IAGQTGVVTEASAIAHFAKSTGLPESFL 470
             L  +Y+     P KA+    +    A     + +   V  A   +  AK   +PE  +
Sbjct: 385 VELSAKYINERHLPDKAIDVIDEAGARARLMPASRRKKTVGVAEIESMVAKMARIPEKSV 444

Query: 471 RDDQPLDDTQVHGFFAQKLFGQDAAIGHLKDVVYLFKAGLNDPAKPIATLLFAGPTGVGK 530
                     +       +FGQDAAI  L + + L +AGL    KP+ + LFAGPTGVGK
Sbjct: 445 SSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIKLTRAGLGAEHKPVGSFLFAGPTGVGK 504

Query: 531 TAAAKALARYFFGAGDDADPLFRIDMSEFQHAFQIARLIGSGK------RPGKLVEHVRR 584
           T     L++           L R DMSE+     ++RLIG+        + G L + V +
Sbjct: 505 TEVTLQLSKLL------GIELLRFDMSEYGERHSVSRLIGAPPGYVGYDQGGLLTDAVIK 558

Query: 585 QPFSVVLLDEIEKADASVFDLLLTVLDEGRLRDSRGRMTDFRSTVIVMTTNLGVRHGA-- 642
            P SVVLLDEIEKA   +F+LLL V+D G L D+ GR  DFR+ ++VMTTN GV      
Sbjct: 559 HPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADFRNVILVMTTNAGVAETVKK 618

Query: 643 SLGFGEPANGGGAVHDIRQFFRPEFFNRIDRVVPFAPLSRTAIEAIA---VQELQAIAQR 699
           S+G  +  N   A+ +I++ F PEF NR+D ++ F  L    I  +    + ELQA    
Sbjct: 619 SIGLIQQDNSHDAMSEIKKVFTPEFRNRLDHIIWFNSLDERVIHQVVDKFIVELQA---- 674

Query: 700 EGLARRGVRLNFSPEVVAFVADKGFSPKYGARPLQRAVEQHVVAAVA-RAMFGPVADGAC 758
             L  RGV L  S +   ++A KG+  + GARP+ R +++ +   +A   +FG + DG  
Sbjct: 675 -QLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKKPLANELLFGSLVDGGT 733

Query: 759 LEVGLVD 765
           ++V L D
Sbjct: 734 VKVTLSD 740