Pairwise Alignments

Query, 1067 a.a., ClpB protein from Variovorax sp. SCN45

Subject, 861 a.a., ATP-dependent chaperone ClpB from Dechlorosoma suillum PS

 Score =  183 bits (464), Expect = 5e-50
 Identities = 116/309 (37%), Positives = 172/309 (55%), Gaps = 20/309 (6%)

Query: 409 IGRDDALAAFCAETGMPRRMLDARLPLSLDEVDGFFRSRLFGQPEALSVVTNLLVATKAG 468
           +G ++        TG+P   +       L +++     R+ GQ EA+ +V++ +  ++AG
Sbjct: 534 VGAEEIAEVVSRATGIPVSKMMQGERDKLLKMEDRLHQRVVGQDEAVRLVSDAIRRSRAG 593

Query: 469 LARGGKPIASMLLIGPTGVGKTETAKALAEFMFGDPRRMIRIDMSEYADPAAVLRLLGDL 528
           L+   +P  S L +GPTGVGKTE  KALAEF+F     +IRIDMSE+ +  +V RL+G  
Sbjct: 594 LSDPNRPYGSFLFLGPTGVGKTELCKALAEFLFDSEDHLIRIDMSEFMEKHSVARLIGAP 653

Query: 529 GG-----DEGVLIGAVRRQPFSVVLFDELEKAHPSFFDLLLQVLGEGRLTGGDGLTANFC 583
            G     + G L  AVRR+P+SV+L DE+EKAHP  F++LLQVL +GR+T G G T +F 
Sbjct: 654 PGYVGYEEGGTLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFK 713

Query: 584 GSFVVMTSNLGAEAMQRM-----PMGLGAVRGDPRAHFEQAVQQALRPELFNRIDHIVPF 638
            + +VMTSNLG++ +Q+M      +   AV G+ +++F        RPE  NRID  V F
Sbjct: 714 NTVIVMTSNLGSQMIQQMAGDDYQLIKLAVMGEVKSYF--------RPEFINRIDEAVVF 765

Query: 639 APLSATERAPIFGREMTLLRKREGLLERSAELTLDDDVAARLAALPGDERYGARDVQRVL 698
             L       I   ++  L KR   LE   E+   D     LA    D  +GAR ++R +
Sbjct: 766 HSLDEKNIRNIARIQLGYLEKRVAQLEMRLEVA--DSALDELAKAGFDPIFGARPLKRAI 823

Query: 699 RRQLLLPLA 707
           ++ +  PLA
Sbjct: 824 QQHIENPLA 832



 Score = 43.1 bits (100), Expect = 9e-08
 Identities = 44/208 (21%), Positives = 85/208 (40%), Gaps = 11/208 (5%)

Query: 204 RFARSVLVVGAESSGKTALIHQYAR-----ERRDRAAGSP-WETSAARLIQGLTRDGSWQ 257
           R   + +++G    GKTA++   A+     E  +   G        A L+ G    G ++
Sbjct: 197 RTKNNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLKGKKVLVLDMAGLLAGAKYRGEFE 256

Query: 258 QALTTLCRELATRE--VVLYVGHLAELFEVGQYQGNSISLGDALREPLARGQLMVLAEAT 315
           + L  +  ++A  E  ++L++  +  +   G+ +G +I  G+ L+  LARG+L  +   T
Sbjct: 257 ERLKAVLNDIAKDEGRIILFIDEIHTMVGAGKAEG-AIDAGNMLKPALARGELHCIGATT 315

Query: 316 PAELSQIDLRSPGFSALFQTLRLPELPEAEQERTMLAAV-AALAAQHRVAVSPDAVSELI 374
             E  +   +       FQ + + E P  E    +L  +       H V ++  A+    
Sbjct: 316 LDEYRKYIEKDAALERRFQKVLVDE-PSVEATIAILRGLQEKYELHHGVDITDPAIVAAA 374

Query: 375 ALQRRFSPYSGFPGKGIRFFEELILHVR 402
            L  R+      P K I   +E    ++
Sbjct: 375 ELSHRYITDRFLPDKAIDLIDEAAARIK 402