Pairwise Alignments

Query, 869 a.a., DNA gyrase subunit B (EC 5.99.1.3) from Variovorax sp. SCN45

Subject, 830 a.a., DNA gyrase, B subunit from Dechlorosoma suillum PS

 Score = 1113 bits (2879), Expect = 0.0
 Identities = 583/852 (68%), Positives = 671/852 (78%), Gaps = 28/852 (3%)

Query: 19  PEIETAAAADNSYGEGSITILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVVDNSIDEAL 78
           P++ T      +YGE SI ILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVVDNSIDEAL
Sbjct: 6   PQMNTPQEGAPAYGESSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVVDNSIDEAL 65

Query: 79  AGHCDDIVVTIHSDNSISVTDNGRGIPTGVKMDDKHEPKRSAAEIALTELHAGGKFNQNS 138
           AGHCDDI VTIH+DNSISVTDNGRGIPTGVKMDDKHEPKRSAAEIALTELHAGGKFNQNS
Sbjct: 66  AGHCDDITVTIHADNSISVTDNGRGIPTGVKMDDKHEPKRSAAEIALTELHAGGKFNQNS 125

Query: 139 YKVSGGLHGVGVSCVNALSVMLRLVVRREGKIHELEFSRGFVQNRLLETVSGVEVSPMKI 198
           YKVSGGLHGVGVSCVNALS  LRL +RR+GK H +EF+RG    R++E   G EVSP+K+
Sbjct: 126 YKVSGGLHGVGVSCVNALSKWLRLTIRRDGKRHFIEFNRGVPVERVIEVRDGFEVSPLKV 185

Query: 199 IGDTDKRGTEVHFLPDTQIFKENNDFHYEILSKRLRELSFLNNGVRIRLKDERTGKEDDF 258
           +GDTDKRGTEVHFL D +IF    +FHYEIL+KRLRELSFLNNGV IRL D+R GKE+ F
Sbjct: 186 LGDTDKRGTEVHFLADDEIFG-TVEFHYEILAKRLRELSFLNNGVSIRLVDQRNGKEELF 244

Query: 259 SGAGGVRGFVEFINKGKTVLHPNSFYAEGERPADTYGGIPGTHIGVEVAMQWNSGYNEQV 318
           + AGGV+ FVE+IN+ K+VLHP+ FY+ GE       G  G  IGVEVAMQWN  Y EQV
Sbjct: 245 AFAGGVQSFVEYINRTKSVLHPSIFYSAGEAKV----GDTGVTIGVEVAMQWNDSYQEQV 300

Query: 319 LCFTNNIPQRDGGTHLTGLRAAMTRVINKYIEENEFAKKAKVEVTGDDMREGLCCVLSVK 378
           LCFTNNIPQ DGGTHLTGLRAAMTR+INKYIEENE AKKAKVE+TGDDMREGL CVLSVK
Sbjct: 301 LCFTNNIPQSDGGTHLTGLRAAMTRIINKYIEENEIAKKAKVEITGDDMREGLACVLSVK 360

Query: 379 VPEPKFSSQTKDKLVSSEVRAPVEDIVGKLLTDYLQERPNDAKIICGKIVEAARAREAAR 438
           +P+PKF+SQTK KLVSSE R  VE++V   LT++L ERP DAK ICGKIVEAARAR+AAR
Sbjct: 361 MPDPKFASQTKMKLVSSEARPAVEEVVAAKLTEFLLERPVDAKTICGKIVEAARARDAAR 420

Query: 439 KAREMTRRKGVLDGMGLPGKLADCQEKDPALCEVYLVEGDSAGGSAKQGRDRKFQAILPL 498
           KAREMTRRKG+LDG+GLPGKLADCQEKDP  CE+YLVEGDSAGGSAKQGRDRKFQAILPL
Sbjct: 421 KAREMTRRKGILDGVGLPGKLADCQEKDPTQCELYLVEGDSAGGSAKQGRDRKFQAILPL 480

Query: 499 RGKILNVEKARYEKLLTSNEILTMITALGTGIGRAGATTAGGGADDFNVAKLRYHRIIIM 558
           +GKILNVEKAR++KL++S EI T+ITALGTGIG+          D++   KLRYHRIIIM
Sbjct: 481 KGKILNVEKARFDKLISSQEIATLITALGTGIGK----------DEYKPEKLRYHRIIIM 530

Query: 559 TDADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQPPLYKVKVGKEEQYLKDGPALDAFL 618
           TDADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQPPLYKVK GK E+YLKD      FL
Sbjct: 531 TDADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQPPLYKVKHGKTERYLKDDHEYQQFL 590

Query: 619 LKVALKDARIETGGASSTTLSGDTLAELARKHQVAEAVIARLRNFMDAEALRAIA-DGVA 677
           L++A++   +    A +  +SG  L  LAR++ +AEAVI RL N ++ E L A+    + 
Sbjct: 591 LQMAMEGTEL-LPRAGAEPISGAALESLAREYLLAEAVINRLSNHINPEVLHALVHHNLE 649

Query: 678 LDLDTTPAAEASAVALQAKLRELNTTGVPAEVSSEFDARTDKPLLRISRRHHGNIKSSVL 737
           L LD   AA+ASA    A L ++++ G+  +V + ++   +   +R+ + HHGN K S +
Sbjct: 650 LKLDDEAAAKASA----ALLAKVSSDGI--DVFAHYNEAQESWQVRMEKMHHGNRKVSSI 703

Query: 738 TQDFVHGADYAALAEAANTFRGLLSPEGALVKRGEGERAKEEKVDDFRQAMKWLISEAER 797
            +DF+   DY  L + A    GL  P G L++RGE    K+  V DF   M WL++E E+
Sbjct: 704 DEDFLRSGDYLQLRKTAELLNGLFGP-GGLIQRGE----KKMAVADFASTMTWLLNEVEK 758

Query: 798 ATSRQRYKGLGEMNPEQLWETTMDPTVRRLLRVQIDDAIEADRVFTMLMGDEVEPRREFI 857
             S+QRYKGLGEMNPEQLWETTMDP VRRLLRV IDDAI AD VFT LMG+ VEPRR FI
Sbjct: 759 GISKQRYKGLGEMNPEQLWETTMDPNVRRLLRVGIDDAIGADEVFTTLMGELVEPRRNFI 818

Query: 858 EQNALRAANIDV 869
           E NALRA NIDV
Sbjct: 819 ESNALRAQNIDV 830