Pairwise Alignments

Query, 459 a.a., Chromosomal replication initiator protein DnaA from Variovorax sp. SCN45

Subject, 482 a.a., chromosomal replication initiator protein DnaA from Pseudomonas stutzeri RCH2

 Score =  444 bits (1142), Expect = e-129
 Identities = 234/478 (48%), Positives = 318/478 (66%), Gaps = 32/478 (6%)

Query: 10  LWQACVDQLAQELSEQQFNTWIKPLTAQVADDLSRMTVFVANRFKLDWIRAQYAGKIAAM 69
           LWQ CV+ L  EL  QQFNTWI+PL  QV  D   + V+  NRF LDW+  +Y  ++  +
Sbjct: 5   LWQQCVELLRDELPAQQFNTWIRPL--QVEGDGEELRVYAPNRFVLDWVNEKYLSRLLEL 62

Query: 70  -AEKMYGQPVAIELALAPRETP---------VRSAPVAVMTETDVPRDVAGPGEEPAAA- 118
            +E+  G   A+ L +  + T           R+ P   +  T  P   +    EP +A 
Sbjct: 63  LSERSSGLAPALSLLIGSKRTSSAALPSAAAARAQPQPTVVSTPAPAAPSPARFEPLSAD 122

Query: 119 -----------------GFKNR--LNSGLTFDTLVEGTANRMARAAAMHVAGMPGHLYNP 159
                            G K+   LN   TF+  VEG +N++ARAAA  VA  P H YNP
Sbjct: 123 TSEPEQPRVERNVQVEGGLKHTSYLNRTFTFENFVEGKSNQLARAAAWQVADNPKHGYNP 182

Query: 160 LFIYGGVGLGKTHLMHAVGNRLLADRADSKVLYIHAEQFVSDVVKAYQRKTFDEFKERYH 219
           LF+YGGVGLGKTHLMHAVGN LL    ++KV+Y+H+E+FV+D+VKA Q    +EFK  Y 
Sbjct: 183 LFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYR 242

Query: 220 SLDLLLIDDVQFFANKDRTQEEFFNAFEALLAKKSHIVMTSDTYPKGLADIHERLVSRFD 279
           S+D LLIDD+QFFA K+R+QEEFF+ F ALL     +++TSD YPK +  + ERL SRF 
Sbjct: 243 SVDALLIDDIQFFAKKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIDGLEERLKSRFG 302

Query: 280 SGLTVAIEPPELEMRVAILINKARAESAEMPEEVAFFVAKNVRSNVRELEGALRKILAYS 339
            GLTVA+EPPELE RVAIL+ KA     ++P + AFF+A+ +RSNVRELEGAL++++A++
Sbjct: 303 WGLTVAVEPPELETRVAILMKKADQAKVDLPHDAAFFIAQRIRSNVRELEGALKRVIAHA 362

Query: 340 RFNQKEISIALAREALRDLLSIQNRQISVENIQKTVADYYKIKVADMYSKKRPASIARPR 399
            F  ++I+I L RE+L+DLL++Q++ +SV+NIQ+TVA+YYKIK++D+ SK+R  S+ARPR
Sbjct: 363 HFMGRDITIELIRESLKDLLALQDKLVSVDNIQRTVAEYYKIKISDLLSKRRSRSVARPR 422

Query: 400 QIAMYLAKELTQKSLPEIGELFGGRDHTTVLHAVRKISGERQQLTELNQQLHVLEQTL 457
           Q+AM L+KELT  SLPEIG+ FGGRDHTTVLHA RKI+  R+   ++ +    L +TL
Sbjct: 423 QVAMALSKELTNHSLPEIGDAFGGRDHTTVLHACRKIAELRETDADIREDYKNLLRTL 480