Pairwise Alignments

Query, 187 a.a., Putative transmembrane protein from Variovorax sp. SCN45

Subject, 87 a.a., TMEM165/GDT1 family protein from Methanococcus maripaludis S2

 Score = 58.5 bits (140), Expect = 3e-14
 Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 6/81 (7%)

Query: 108 IAFFLAEMGDKTQIATVMLAARFTQDYFWVVA--GTTLGMMLANAPVVWLGDKIVRRVPI 165
           +A FLAE+GDKTQ+AT+  A++    Y W  A  G+ + + L N     +GDK+   +P 
Sbjct: 9   VAIFLAELGDKTQLATLAFASK----YGWAKAFLGSIVALALVNLLGALIGDKLGVTLPT 64

Query: 166 KLVHGISAAIFLALGVIMIIG 186
           +++  +S A+F+ +G++M+ G
Sbjct: 65  EIIQKLSGAVFVIVGILMLFG 85



 Score = 40.0 bits (92), Expect = 1e-08
 Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 1/84 (1%)

Query: 1  MEAFLVATGVVALAEMGDKTQLLALLLAARFRKPWPIVLGIFAATIINHALAGAVGNYIT 60
          M+  L+    + LAE+GDKTQL  L  A+++      +  I A  ++N  L   +G+ + 
Sbjct: 1  MKEILIVFVAIFLAELGDKTQLATLAFASKYGWAKAFLGSIVALALVN-LLGALIGDKLG 59

Query: 61 HWLGPDVLRWILGGSFIAMAVWML 84
            L  ++++ + G  F+ + + ML
Sbjct: 60 VTLPTEIIQKLSGAVFVIVGILML 83