Pairwise Alignments

Query, 306 a.a., Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family from Variovorax sp. SCN45

Subject, 292 a.a., voltage-gated K+ channel protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  210 bits (535), Expect = 3e-59
 Identities = 102/231 (44%), Positives = 158/231 (68%), Gaps = 2/231 (0%)

Query: 27  RRTLFTVIFEADTRAGLWFDLALIAVIVTSVLVVILDSVQSIREHWRPVFNALEWVFTIL 86
           +  L+ +IFE+DT +G  FD+ LI  I+ SVL+VI++S++ +  +    F  +E++FT  
Sbjct: 17  KHKLYIIIFESDTPSGKLFDVVLIGCILASVLLVIIESLKGLPSYLTTPFVVMEYLFTAF 76

Query: 87  FTLEYIARLCCVNKPLRYALSFYGVIDLLALLPTFLVALAPELAYLIDVRILRLLRVFRI 146
           FT EY+ R+ C  +P +Y  SF+G++DLLA LP ++  + P   YL+ +R  RL+RVFR+
Sbjct: 77  FTFEYLTRIYCSPRPKKYIFSFFGIVDLLATLPLYIGLIFPGARYLLIIRAFRLIRVFRV 136

Query: 147 FKLSRYSAEYRALVMAVASSRRKITVFVGFVMLVVLVMGTLMYVVEG--PEHGFTSIPVA 204
           FKL  +  E   L+ A+  S +KI VF  FV+++V  +GTLMY++EG  P   F +IP +
Sbjct: 137 FKLFNFLNEGERLLTALRESSKKIAVFFLFVVILVTSIGTLMYMIEGTLPNSQFNNIPNS 196

Query: 205 IYWAISTMATVGFGDLVPKTDLGRAIASVMMLLGWGVLAVPTGIVTAEMAR 255
           IYWAI TM TVG+GD+ P T LG+ +++ +ML+G+ ++AVPTGIV+A M +
Sbjct: 197 IYWAIVTMTTVGYGDITPVTGLGKFLSACVMLIGYTIIAVPTGIVSASMMK 247