Pairwise Alignments

Query, 925 a.a., Polysaccharide deacetylase, caspase activity from Variovorax sp. SCN45

Subject, 262 a.a., type IV pilus biogenesis/stability protein PilW (RefSeq) from Shewanella loihica PV-4

 Score = 52.8 bits (125), Expect = 3e-11
 Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 4/107 (3%)

Query: 802 NDRGLQLYRERRYDEAEAAFTEALKLQPRFALAAN---NLGFVYFKRGKPVEAARWFEQA 858
           N+ G+ L ++ +YD+AE  F  A+K+ P++  +A+   NLG    K G   +A R+FE A
Sbjct: 118 NNFGVFLCQQAKYDQAEEMFLRAVKM-PKYTRSASSYENLGICSRKSGDLQKAQRYFEMA 176

Query: 859 IDMDGSRALAYLNLGDAYLQAGNDAKALAAYTTFVGLAPKHARVASL 905
           ++ D  RA + L L +  L  GN + A      +  + P+ A+  +L
Sbjct: 177 LNYDPRRANSLLELSEIELDLGNYSAAKKGLARYHRVVPESAQSLAL 223