Pairwise Alignments

Query, 864 a.a., LPS-assembly protein LptD @ Organic solvent tolerance protein precursor from Variovorax sp. SCN45

Subject, 787 a.a., LPS assembly protein LptD from Vibrio cholerae E7946 ATCC 55056

 Score =  177 bits (450), Expect = 2e-48
 Identities = 181/799 (22%), Positives = 304/799 (38%), Gaps = 101/799 (12%)

Query: 18  PLAVLSLALLQAQGASAQQAPSLDGPLTL--KRTPL------LTETIPPTERGQLPSLVT 69
           P++  S   L A  ++A  AP +    ++   R  L      L     PT  GQ P  V 
Sbjct: 4   PMSCFSRTFLAASISAALFAPQIQAEASVDDNRAQLPNGEQCLVNQPEPTNPGQQPINVE 63

Query: 70  GDRISGRPDLETVVEGNATLRRGALGITADRLEYYQPDDLAKATGNVRVNQGGNVYEGPE 129
            D++      +    GN  + +G   I AD +  +Q +++  A GNV+ + G       +
Sbjct: 64  ADKLEAINGQKATYSGNVVVVQGKKRIAADNVTLHQQENVVVAEGNVQFSDGEIKTHSTK 123

Query: 130 LQLKLETFEGFFNNVRYQFLANEAHGEAQRIDFVDANVSVARQATYTTCRREDFPGWMPA 189
               L T E    N RYQFL     GEA  +      V      + T+C     P    A
Sbjct: 124 ATNHLNTDEMTLENTRYQFLCEPGRGEAVYVSKTGKAVYEIEDGSITSC-----PDGDNA 178

Query: 190 WLLTATTLTTDTEENEGVAKNARLSFMGITTPPIPSVSFPLSSERKSGLLPPTIGIDNTN 249
           W + A+++  D  E      N RL    +    +P ++ P+   RK+G L PT    + N
Sbjct: 179 WRMRASSIDVDQNEEIATFYNPRLEVQNVPVFYLPYLTVPIGDTRKTGFLYPTASYGSRN 238

Query: 250 GIEISQPYYWNIAPNRDATITPTIMSKRGVDFSNEFRYLEKDYKGTVRLDFMGSDRLVGQ 309
           G     P YWN+AP  D   T   M KRG   ++ FRYL     G ++ +++  D+L   
Sbjct: 239 GYSFEVPIYWNLAPQYDLETTFNYMQKRGTQLNSVFRYLTDFGAGQIKSEYLADDQL--- 295

Query: 310 RYNELRNTQLQQLMSGQIQPQDLTLGNGPGSTRRWGLWATHHQDFDAKALGLDSLAANIS 369
                 +T+L                       RW     H+  F        +    I 
Sbjct: 296 ------HTELGD---------------------RWAFQYEHNGIFQ------QAWKFEID 322

Query: 370 INRVSDNDYWRDF-TRTPSLAQRQLPNDASLNWAKGDWSGGIRALQYQNLQYNLSPITPA 428
            ++VSD +Y+ D  +   +    QL  +    +   +W   +    +Q L  + +     
Sbjct: 323 YSKVSDINYFSDLDSGVGNREDGQLIQEGRATYRSDNWDSALLVRDFQLLTKDTTSTNLP 382

Query: 429 YDRMPQITANYNKYDWHGFDVSLNLDYTHFRVNTILNGQPGYDPNQQSQPDGDRAMAVAS 488
           Y  MPQ++ NY   +   +   L+LD        +++    ++ + + +P   R      
Sbjct: 383 YRLMPQLSYNYYAPETMKY---LDLD--------LVSHVSRFETDARGKPSATRVHIEPG 431

Query: 489 ISRPFITPSSYVIPKLMLNAATYNYYLPQADIPKLTVNGTQYVGGIPYNPNSLYFYPTSS 548
           +  PF              + T+  +  +A      V GT Y   +    ++      S 
Sbjct: 432 LKIPF--------------SNTWGNWTTEA-----RVLGTYYQQDLDKTTDAKL--EESV 470

Query: 549 TRTVPTFSIDSGLTFERDTSYFGRAFRQTLEPRAYYVYTPYRNQNMLPNYDSAANDFSFA 608
           TR +P     +G+  ERDT      + QTLEP+  Y+Y P + Q+ +  YDS      + 
Sbjct: 471 TRVIPEIRSVAGIVLERDTVLLDD-YTQTLEPKIQYLYVPEKYQDNIGLYDSTLLQTDYY 529

Query: 609 TIYTENAFSGGDRVSDTNALTLGVTSRLIDPATGVEAARVGIAQ------RLRFSNQNVV 662
            ++    +SG DR+   N ++ G ++R  D +   E   +   Q      +L  SN+N  
Sbjct: 530 GLFRSRKYSGVDRIESANQVSYGASTRFFD-SNYKERLNIAFGQIFYLDSKLNPSNKN-- 586

Query: 663 LPGGTPVTDRSSDLLIGGQINWTPKWSVDTLVQYNPDTRKSERSAISARYNPEPYHNLSA 722
            P  T      S   +    N+         +QY+ D++  +    +  Y     + + A
Sbjct: 587 -PDSTSDKTSYSAWAVEMDFNFADYLFYHGGIQYDIDSQAVQLGNSTLEYRVASGY-IQA 644

Query: 723 AFRYQAPSTPTATDGSKSFDVGWQWPVNDLWGDKGKNLGPGKG-QGGGRWYAVGRINYDL 781
            +RY A      T G    +      ++D+  D     G   G Q   +W A G+  YDL
Sbjct: 645 NYRYVAKDYIRNTVGDSITN------IDDITRDGISQAGILAGYQLSRKWSASGQYYYDL 698

Query: 782 DGKKVTDGVLGFEYDGCCW 800
              +  + +    Y   CW
Sbjct: 699 TTDEALEWLANLTYTSDCW 717