Pairwise Alignments

Query, 465 a.a., Periplasmic chaperone and peptidyl-prolyl cis-trans isomerase of outer membrane proteins SurA (EC 5.2.1.8) from Variovorax sp. SCN45

Subject, 629 a.a., peptidyl-prolyl cis-trans isomerse domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 99.0 bits (245), Expect = 4e-25
 Identities = 105/407 (25%), Positives = 169/407 (41%), Gaps = 63/407 (15%)

Query: 54  VQRAAEFIVALVNSEPITNTEVLTRVDRLIKE------NPDAERVPRNELTRLVLDRLIS 107
           +Q     +VA VN +PI   + +   +R ++          A+ + +  L R VL ++++
Sbjct: 33  MQEGPTSVVATVNKKPIVIRDFIREYERQVESLRTRFPGVTADELKKLGLKRQVLQQMVA 92

Query: 108 ERAQLQLAKENGIKVD----EVAIDQAEQTVARQNEISLTELRRRVIAEGLTQAEFRRDL 163
           E    Q A+  GI V       AIDQ         +      ++ + A+      F   +
Sbjct: 93  ETLMQQEAERLGITVTPYELRAAIDQIPAFRDASGKFDPETYKKVLKAQQTVPGRFEEGV 152

Query: 164 RDQLLLTRLRDREVESKVKISDAEADEYLIDQRNVAVKNAALQNLNLAQVLVAVPETATD 223
           R  +L  ++R       V ++DAEA +             A +  ++  VL  + E A  
Sbjct: 153 RKDMLGRKMRALVTAGAV-VTDAEARDMF---------TYAQEKRSIDYVLFPLDEYAAA 202

Query: 224 AQVAAAQKKAQDIAQRARAGE------DFAKLVRENSDAPDRANGGAIGMRSADRYPSLF 277
           A +  A  +A   + +AR  E      DF ++  E+  A       AI    A+   S F
Sbjct: 203 ASIEDAALQAWYDSNKARFTEPQKVRLDFVRISAESLAAGIDIPETAIAAFYAENAASYF 262

Query: 278 VDATQSTAVNGIAGPIRSSAGFHVLKVLAKAQIGSGDATVTQTQVRHILLLNDPKRTTAQ 337
           +   +  A +                +L +   G+ +ATV + + R            A 
Sbjct: 263 MQPERVRARH----------------ILVRVPEGADEATVRKAEER-----------IAD 295

Query: 338 AVAQLAEFKRRLQAGTADFAGLARDNSQDGSAKDGGELGWSRPGQFVPEFEEAMDRLAPG 397
           A AQ+   K        DFA +A   S+DGSA++GGELGW   G+ V  FE+A   L PG
Sbjct: 296 AAAQIKAGK--------DFAAVAAKVSEDGSARNGGELGWFGRGEMVKPFEDAAFGLKPG 347

Query: 398 EISDPVVSRFGVHLIQVEGR--RDAKLTQSEQREAARAALREKRVEE 442
           E+S PV S+FG HLI+ EG   +  K     + E  +    EK +E+
Sbjct: 348 EVSAPVRSQFGFHLIKSEGHEAQRQKALDEVRNEIRKRLAEEKAIEK 394