Pairwise Alignments

Query, 465 a.a., Periplasmic chaperone and peptidyl-prolyl cis-trans isomerase of outer membrane proteins SurA (EC 5.2.1.8) from Variovorax sp. SCN45

Subject, 449 a.a., peptidyl-prolyl cis-trans isomerase from Caulobacter crescentus NA1000

 Score =  108 bits (270), Expect = 4e-28
 Identities = 114/470 (24%), Positives = 215/470 (45%), Gaps = 31/470 (6%)

Query: 1   MKHIRSIITLGCLAAMAASAGAQGFHSGITDIMRAGPR-LGPPVARPAAPTTAPVQRAAE 59
           M+  RS+ T    AA   +       +    + +A P  +    + PAAP     Q  +E
Sbjct: 1   MRSARSVTTFAAGAASILALTVASLGAPAMAMQQAAPEGVAQAPSAPAAP-----QPLSE 55

Query: 60  FIVALVNSEPITNTEVLTRVDRLIKEN---PDAERVPRNELTRLVLDRLISERAQLQLAK 116
            + A+VN + I++ +++ R+  L+  +   P  E +P+ E  +  L  LI ER Q+Q  K
Sbjct: 56  SVAAVVNDDIISSYDLMQRMRLLMATSGMQPTQENLPQIE--QEALRSLIDERLQMQELK 113

Query: 117 --ENGIKVDEVAIDQAEQT----VARQNEISLTELRRRVIAEGLTQAEFRRDLRDQLLLT 170
             E   K+  ++ D+  +     +A+ N +   +L+++++A+G+    +R  LR +    
Sbjct: 114 RVEKQQKITIISTDKEVEEQIGDIAQSNRLQPEQLKQQLVAQGIGLDTWRAQLRAESSWQ 173

Query: 171 RLRDREVESKVKISDAEADEYLIDQRNVAVKNAALQNLNLAQVLVAVPETATDAQVAAAQ 230
                   S+++I + +   Y   QR +A   AA     +++V +   + A    +  A 
Sbjct: 174 SWIQGRYGSRLRIGEDQIKAY---QRRLA-DAAAKPQYQISEVFL---DAARVGGMEVAV 226

Query: 231 KKAQDIAQRARAGEDFAKLVRENSDAPDRANGGAIGMRSADRYPSLFVDATQSTAVNGIA 290
             A  +  + + G  FA + R+ S +   ANGG +G  S    P+    A +      ++
Sbjct: 227 NGATQLINQMQQGAPFAAVARQFSGSATAANGGEVGWVSQGEMPTEVDAALEQLRPGQLS 286

Query: 291 GPIRSSAGFHVLKVLAKAQIGSGDATVTQTQVRHILLLNDPKRTTAQAVAQLAEFKRRLQ 350
            PI+   G +++ +  K + GS  A V   QV   L  +  +   A A  QL + K ++ 
Sbjct: 287 RPIQVKDGVYIIYLRDK-RAGSKTAIVDLKQVAAPLAADATEAQIAAATKQLVDLKPKIT 345

Query: 351 AGTADFAGLARDNSQDGSAKDGGELGWSRPGQFVPEFEEAMDRLAPGEISDPVVSRFGVH 410
           +  +  A  A+    DG     G+LG +      P F+EA ++L  G+ISDP+ +  G+H
Sbjct: 346 SCQSLEATAAK---VDGLV--AGDLGEAEITDLAPAFQEAANKLEVGQISDPIRTDAGLH 400

Query: 411 LIQVEGRRDAKLTQSEQREAARAALREKRVEEAFSTWVQEVRARAYVEYR 460
           LI V G+R      +   +     LR +++      +++++R +A +E R
Sbjct: 401 LIAVCGKRQGG-ANAPTHDQIENRLRGQQLALIAKRYLRDLRNQATIETR 449