Pairwise Alignments

Query, 334 a.a., Nucleoside ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 328 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  282 bits (721), Expect = 9e-81
 Identities = 151/329 (45%), Positives = 208/329 (63%), Gaps = 5/329 (1%)

Query: 4   RRQLIIRSVAIAAALAAGAPGLALAQQAK--LKVAAVYTVPFEQQWVGRIHKALKAAEAR 61
           R  ++ R   +A+ L  G   LA A +A   +KVA V+  P E  W   +HKAL+ A A 
Sbjct: 3   RDLMMSRRNVLASGLVLGVSALAPAVRASAPIKVAGVHASPVENAWNSVLHKALQDAAAE 62

Query: 62  GEIEYKATENVSNADYERVMREYATGGNQLILGEVFGVEAAARKVAKDFPKVAFLMGSSL 121
           G IEY  +E +S  DY R MREYA  G +LI+GE + VE  AR+VA D+P+ AF++GSS 
Sbjct: 63  GVIEYVFSEGISGTDYPRAMREYAEQGAKLIIGEAYAVEKQAREVAADYPETAFVLGSSG 122

Query: 122 KPQAPNFSVFDNYIQEPAYLSGMVAGGVTKTNRIGMVGGFPIPEVNRLMNAFMAGAKETN 181
           K    NF VF  +  + AYL+GM+AG +TK+N +G VG  PIPEVN L+NAF AG K  N
Sbjct: 123 KESGDNFGVFGTWNHDGAYLAGMLAGKMTKSNVVGSVGAMPIPEVNMLINAFAAGVKAVN 182

Query: 182 PKVEFSVSFINSWFDPPKAKEAAFAMIDKGADVMYAERFGVSDAAKEKGKLAIGNVIDTQ 241
           P  +  V+FI ++FDPPKA+EA  A ID GAD+++ ER G +DAAKE+G  ++G++ID  
Sbjct: 183 PDAKHLVTFIGTFFDPPKAREAGLAQIDAGADILFGERIGTADAAKERGLKSVGSLIDYT 242

Query: 242 SQYPDTVVASALWNFEPAADHAIKLVKEGKFAAEDYGVYAQMKHKGSELAPLGTFEKKVP 301
            +YPDTV A+ALW F P  + AI  V  GK   +DY  +  +K  GS++A +   +   P
Sbjct: 243 PRYPDTVFANALWGFRPILNAAIADVSAGKPVGKDYTAFGLLKEGGSDVAYV---KGVAP 299

Query: 302 ADIIAKVKAKQADILAGKFTVKVDDGQPK 330
           AD  A ++AK+A+I +G F V     +PK
Sbjct: 300 ADAEAAMEAKRAEIKSGAFEVPRITDEPK 328