Pairwise Alignments

Query, 334 a.a., Nucleoside ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 326 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 72/232 (31%), Positives = 109/232 (46%), Gaps = 10/232 (4%)

Query: 4   RRQLIIRSVAIAAALAAGAPGLALAQQAKLKVAAVYTVPFEQQWVGRIHKALKAAEARGE 63
           RR  +  +VA+AA +AAG P  A     K+ +    +V  E+ W      ALK  EA   
Sbjct: 4   RRGCLGSAVAMAALIAAG-PAFAEGSPFKMGLLVPGSVS-EEGWNRIGFNALKGVEAELG 61

Query: 64  IEYKATENVSN-ADYERVMREYATGGNQLILGEVFGVEAAARKVAKDFPKVAFLMGSSLK 122
            E    E   N A +E+  R++A+ G  +ILG  F  + AA +VA ++P   FL+ SS  
Sbjct: 62  AEVSYVELQQNPASFEKAFRDFASQGYNVILGHGFEFQDAALEVAPEYPDTVFLISSSYI 121

Query: 123 PQAPNFSVFDNYIQEPAYLSGMVAGGVTKTNRIGMVGGFPIPEVNRLMNAFMAGAKETNP 182
            +  N    +    +P YL G++A    K  + G+VGG  IP +      F  G +   P
Sbjct: 122 FEG-NVIGLNTDTSQPFYLMGVIAAKTGK--KAGLVGGMEIPPIKEAFEGFTNGVRSVAP 178

Query: 183 KVEFSVSFINSWFDPPKAKEAAFAMIDKGADVMYAERFGVS----DAAKEKG 230
               S  +I ++ D    KEA+ ++I +GAD +     G +     AA E G
Sbjct: 179 DFPVSEVYIGNFTDATATKEASLSLISQGADFVLPNASGATVGGFQAAAESG 230