Pairwise Alignments

Query, 337 a.a., DNA polymerase III delta prime subunit (EC 2.7.7.7) from Variovorax sp. SCN45

Subject, 318 a.a., DNA polymerase III, delta prime subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 71/229 (31%), Positives = 102/229 (44%), Gaps = 35/229 (15%)

Query: 8   PWLRRP----LAELLRQR-GHAWLLQGPSGIGQYELALALASAWLCEQPTAEGTACGHCA 62
           PWL  P    L +L  Q+  HA L+   S  G   L++ +A A +C QPT  G  CG C 
Sbjct: 13  PWLDVPRQAFLTQLQTQKVPHAQLVGIDSAYGGELLSVFMARAAMCSQPTHTG-GCGFCK 71

Query: 63  SCHAIEVRTHADLCVLMPEVAMQELGWPLDEKAQADIDDKKRKASREIRVEAMRDAVGFA 122
           SC   +   H D   +                 +AD          +I+V+ +R+     
Sbjct: 72  SCQLFDAGNHPDFYQI-----------------EAD--------GHQIKVDQIRELCSRL 106

Query: 123 QRTSARGRGKVVLVYPAERMNTITANALLKTLEEPVGDVRFVLASEAAWQLLPTIRSRCL 182
             T+ +   +V +++ +ER+N+ +ANALLKTLEEP  D   +L S+   +L+ TI SRC 
Sbjct: 107 SATAQQSGRRVAIIHHSERLNSASANALLKTLEEPGKDTLLLLHSDTPARLMATISSRCQ 166

Query: 183 GFTLPWPETAEAEAWLAAQDVPAADAAALLRAAGGRPSDALRLARSGQS 231
                 P     + WL  Q     D    L   GG     L+LA S QS
Sbjct: 167 RLPFVAPSKTLIKNWLIQQCQIQEDVTWCLSVVGG----PLKLAESLQS 211