Pairwise Alignments

Query, 337 a.a., DNA polymerase III delta prime subunit (EC 2.7.7.7) from Variovorax sp. SCN45

Subject, 336 a.a., DNA polymerase III, delta from Caulobacter crescentus NA1000

 Score = 99.8 bits (247), Expect = 9e-26
 Identities = 92/287 (32%), Positives = 124/287 (43%), Gaps = 34/287 (11%)

Query: 23  HAWLLQGPSGIGQYELALALASAWLCEQPTAEGTACGHCAS---CHAIEVRTHADLCVLM 79
           HAWLL GP G+G+  LA  +A   L  +P       G   S      +  R+H DL VL 
Sbjct: 35  HAWLLTGPEGVGKATLAYRMARRLLGARPDPSQGLLGAAPSDVVSRQVAARSHPDLMVL- 93

Query: 80  PEVAMQELGWPLDEKAQADIDDKKRKASREIRVEAMRDAVGFAQRTSARGRGKVVLVYPA 139
                        E+   D      KA + I V+  R    F   + A    +V ++  A
Sbjct: 94  -------------ERLTDD-----GKARKSIPVDEARKLPEFFANSPAVSPYRVAIIDAA 135

Query: 140 ERMNTITANALLKTLEEPVGDVRFVLASEAAWQLLPTIRSRCLGFTLPWPETAEAEAWLA 199
           + +N   ANA+LKTLEEP      +L S A  +LLPTIRSRC    +P P  A A   + 
Sbjct: 136 DDLNVNAANAVLKTLEEPPARGVILLISHAPGKLLPTIRSRCRRLAIPAPGVAAAAEMVE 195

Query: 200 AQ-DVPAADAAALLRAAGGRPSDALRLARSG------QSPKAWSLLPKAMSRGDVGALAD 252
              DVP  DA  L R A G P  AL+LA +G       + +    LPK +  G + A+AD
Sbjct: 196 RMADVPHRDAERLARMAHGAPGRALQLAAAGAIAIDDAANEILRSLPK-LDEGALLAMAD 254

Query: 253 HAPAQAVGALQKLCHDLMAVGNGAEPRFFDAADLPAAPSRLALARWS 299
                   A  +L  D +A     + R F         + L L RW+
Sbjct: 255 TFRGAEGAARFELLMDRLA----DQVRIFATQVAADGKNSLGLDRWA 297