Pairwise Alignments

Query, 653 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 972 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  348 bits (894), Expect = e-100
 Identities = 198/429 (46%), Positives = 264/429 (61%), Gaps = 7/429 (1%)

Query: 211 QANHELQKRAFTDALTGLPNRVLFEDRLRHALARMNRANQLQVEECIAVLFVDLDGFKPI 270
           QA   +   A+ D LTGLPNR LF DRL +AL + +R+ +      +AVL +DLD FK +
Sbjct: 529 QAEAHIHHLAYHDPLTGLPNRRLFYDRLENALRQAHRSRRK-----LAVLLLDLDRFKAV 583

Query: 271 NDSFGHSAGDRILCVAAERLARNTRESDTVARIGGDEFLLLLEGVHDRAECAEAANRVLR 330
           ND+ GH  GD +L     RL+   RE DT+AR+GGDEF+LLL  V    + +  A ++L 
Sbjct: 584 NDTLGHDQGDLLLKEVGARLSLCLREGDTLARLGGDEFVLLLPEVLSAEDASIVAGKLLA 643

Query: 331 ALGEPFNVQGKLLQIACSIGIVLHPEQGEP-DKLVANADAAMYEAKRAGGGNYVMFESHM 389
              +P  +  + +  + SIGI L+P  GE  + L+ +AD AMY AK  G   Y  F +  
Sbjct: 644 QFDQPVRLGEREIFASTSIGIALYPADGEDGESLLKHADVAMYAAKDGGRAAYRFFIASH 703

Query: 390 GADAAKQLQLQSDLRRAVELKQFELYYQPKINGVGDSISGVEALVRWNHPQHGLIGPTEF 449
              + ++L+L++DLRRAVE +Q  LYYQP+I      I+GVEALVRW HP  GL+ P  F
Sbjct: 704 NERSLERLELENDLRRAVEGEQLLLYYQPQIGASSGRIAGVEALVRWRHPTRGLVMPDSF 763

Query: 450 IGLAERFGLIVHLGDWILDEACRQIAQWQAQGTQMC-VAVNLSVMQLREVDFVARVERAL 508
           I LAE  GLI  +G W L  ACRQ+  WQ QG  +  VAVN+S  QLR  DF   V + +
Sbjct: 764 IALAENAGLIDAIGHWCLVAACRQLRAWQEQGVPVPRVAVNVSARQLRRWDFAQEVLQVV 823

Query: 509 LRHNVPASLLLCEITESVAMEDIKATQRTLEGLARVGVFLSIDDFGTGYSSLSHLRKLPA 568
            +  +  + L  E+TES   +D +        L + GV +SIDDFGTGYSSLS+L + P 
Sbjct: 824 TQSGIDPAGLELELTESSLADDPEQILAIFSTLRQAGVRVSIDDFGTGYSSLSYLSRYPV 883

Query: 569 RQVKIDRSFVQDLQTKEDARAVIDAVIRLAHALGLSVVAEGVENEAQRDILLAMGCDELQ 628
            +VKIDRSFV  L    +AR+V+ AVI LAH LG+  VAEGVE EAQ  +L  + CDELQ
Sbjct: 884 DEVKIDRSFVSRLLDDREARSVVRAVILLAHGLGMRTVAEGVETEAQWQVLSDLDCDELQ 943

Query: 629 GFLFSRPLP 637
           G+LFS+P+P
Sbjct: 944 GYLFSKPVP 952