Pairwise Alignments

Query, 505 a.a., Uncharacterized protein YjgR from Variovorax sp. SCN45

Subject, 493 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  492 bits (1266), Expect = e-143
 Identities = 254/486 (52%), Positives = 341/486 (70%), Gaps = 15/486 (3%)

Query: 22  ANRHGLITGATGTGKTVTLQTMAEKLSGIGVPVFMADVKGDLTGISQKGSIGAKLAATLK 81
           ANRHGLI GATGTGKTV+L ++AE  S  GVPVF+ D+KGD++G+   G+   KL     
Sbjct: 20  ANRHGLIAGATGTGKTVSLMSLAEGFSRQGVPVFITDIKGDISGLGVAGTPNDKLLQRAA 79

Query: 82  ERGIDVPEPSACPVTLWDVFGDQGHPVRATISDMGPLLLSRMLDLNDTQAGVLNLVFKIA 141
           E G++  +  A PV  WD+ G QGHP+R T+S+MGP LL R+L+LNDTQ+ +L++VF++A
Sbjct: 80  EIGVEGYQTEANPVVFWDLAGIQGHPLRTTVSEMGPTLLGRILELNDTQSSILDIVFQLA 139

Query: 142 DDNGLLLLDLKDLRAMLQYVGENASQFTTQYGNISAASVGAIQRGLVQIETQGGDKFFGE 201
           DD GLLLLDL DLRAML  V +     + +YG ISA S+ AIQR ++ +E  GG  FFGE
Sbjct: 140 DDQGLLLLDLDDLRAMLNLVADERKDISAKYGLISAQSLAAIQRSVLGLERDGGKDFFGE 199

Query: 202 PMLNIADFMQT-VGGKGVINILAADKLMNSPRLYATFLLWMLSELFEQLPEIGDPEQPKL 260
           P L + D M+T + G+G+IN+LAA+KL+ +P LY++FLLW+LSELFE LPE+GD ++PKL
Sbjct: 200 PALQLEDLMRTNLQGRGIINLLAANKLILTPNLYSSFLLWLLSELFENLPEVGDLDKPKL 259

Query: 261 AFFFDEAHLLFNEAPKALVERIELVVRLVRSKGVGVYFVTQNPLDIPDTVLAQLGNRVQH 320
            FF DEAHLLF   P +L++RIE ++RL+RSKGVGVYF +Q P DIP+ +L QLGNR+QH
Sbjct: 260 VFFIDEAHLLFEGCPASLLKRIEQIMRLIRSKGVGVYFCSQFPDDIPNEILGQLGNRIQH 319

Query: 321 ALRAFTPRDQKAVKAAASTMRQKPGLDIETAITELAVGEALVSFLDEKGRPSVTERVFVL 380
           ALRA+TPRDQKAVK AA T    P L +   I++LAVGEALVS L EKG P++ ER  + 
Sbjct: 320 ALRAYTPRDQKAVKTAAETFVSNPKLVVSEVISQLAVGEALVSTLAEKGVPTMVERTLIA 379

Query: 381 PPGSQLGPITPDQRKALIANSLVAGVYEKAVDRESAYEKLKGR-ADSAPGAPTATLPGGK 439
           PP  ++GP  P++  A+ A S + G Y+  ++RESAYE+L  R  D   G  TA     +
Sbjct: 380 PPRCRMGPANPEELTAIRALSPIGGKYDTLINRESAYERLNQRHTDETNGVNTA-----Q 434

Query: 440 PAAEASGSGMGGMLNDMLFGTTGPRGAKHDGLVQTMAKSAVRTMGTSVGKEILRGVLGGI 499
           PAA  +     G L++++FG       +  GL +T++K A RT+G  +GK+ILRG+LGGI
Sbjct: 435 PAANEAEQ---GWLSELIFG-----NKRRQGLAETLSKQAARTVGNQLGKQILRGLLGGI 486

Query: 500 FGSKKR 505
            G   R
Sbjct: 487 LGKSTR 492