Pairwise Alignments

Query, 506 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 560 a.a., Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II from Pseudomonas stutzeri RCH2

 Score =  213 bits (541), Expect = 2e-59
 Identities = 155/537 (28%), Positives = 243/537 (45%), Gaps = 52/537 (9%)

Query: 7   TVHALIEQQAQRQPHAVYARATETGQHLTYGELARGCRRVAAVLHGAGARPGDTISVVMP 66
           T+ A  ++  +R P              T+ ELA    R A  L   G + G+ + +  P
Sbjct: 19  TIGAAFDRTVERFPQREALVVRHQQLRYTWAELAEAVDRCARGLLALGLQAGERVGIWSP 78

Query: 67  NGLQTLRLLLGAMHGGLRVNPVNLLSQPEQMRYVLAHADCR-VVC--------------- 110
           N  Q           G+ +  +N   +  ++ Y L  + CR ++C               
Sbjct: 79  NNAQWCITQFATAKIGVVLVNINPAYRLSELEYALKQSGCRWLICADAFKTSDYHAMLHE 138

Query: 111 VAPEWEA------------RVREIVQAFDRPVTVLV-----------VDPEAEVLPGETE 147
           + PE E+             +R ++   D+PV  ++           V PE     GE  
Sbjct: 139 LLPELESAAVGALQSHMLPELRGVISLCDKPVDGMLQWQALMEMAEQVGPEQLRQCGER- 197

Query: 148 APAVAVPPPLPDAVALLMYTSGTTGMPKGVMLSQRNLAANAYAISAEHGLRSSDRVLAVL 207
              +    P+      + YTSGTTG PKG  LS  N+  N Y +     L   DR++  +
Sbjct: 198 ---LQFDDPIN-----IQYTSGTTGFPKGATLSHYNILNNGYMVGESLRLTEHDRLVIPV 249

Query: 208 PLYHINAFTVTMLAPLAHGGSLAMPPK-FSAGRFWEQATQTQCSWINLVPTMISYLLEGP 266
           PLYH     +  L  + HG ++  P   F      + A + + + +  VPTM   +L+ P
Sbjct: 250 PLYHCFGMVMGNLGCVTHGTTMIYPSAAFEPLAALQAAAEEKATGMYGVPTMFIAMLDHP 309

Query: 267 KPPLAQTLAIRFCRSASAALPPEHLRAFEQKFGIGIVE-TMGLTETAAPSFSNPMDP-AA 324
           +       ++R    A +  P E ++       +  ++   G+TET+  S     D    
Sbjct: 310 ERQSLDLSSLRTGIMAGSTCPIEVMKRVIDDMHLAEMQIAYGMTETSPVSTQTSADDDLE 369

Query: 325 RKLGSVGRASGCMAG-VVDAKLSAVPDGVTGELVIRGPNVMLGYYKNEEATRASFTPDGW 383
           R++ SVGR    +   +VD   + VP G  GEL  RG +VMLGY+ N +ATR +     W
Sbjct: 370 RRVTSVGRTQPHLESKIVDEHGAVVPRGQIGELCTRGYSVMLGYWNNPDATRDAIDGARW 429

Query: 384 LRTGDLGHRDEDGFFFVTGRIKELIIKGGENIAPREIDEALMRHPAVREAAAVGVPDRHY 443
           + TGDL   D++G+  + GR K++II+GGEN+ PREI+E L  HPAV +   +GVPD  +
Sbjct: 430 MHTGDLAVMDDEGYIKIVGRNKDMIIRGGENVYPREIEEFLFTHPAVADVQVIGVPDSKF 489

Query: 444 GQEIGVCIVLREGCACTEDELRAFGAEALGRYKTPGHYRFVNDLPRGPSGKVQRLKL 500
           G+EI   + L  G     + LR F    +  +KTP H +FV+D P   SGKVQ+ ++
Sbjct: 490 GEEIVAWVKLHPGHEVEGEALREFCKGRIAHFKTPRHIKFVDDFPMTISGKVQKFRM 546