Pairwise Alignments

Query, 461 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 495 a.a., efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family from Pseudomonas stutzeri RCH2

 Score = 75.9 bits (185), Expect = 3e-18
 Identities = 115/478 (24%), Positives = 190/478 (39%), Gaps = 59/478 (12%)

Query: 16  LAALALSVALGGCATYRGAPLPDAPSFPATVPQARLDGIDGALPMLAARPFD---ATDGL 72
           LA   L+++LG C      P    P  P      + +G   A P  A +  +        
Sbjct: 18  LAVAVLALSLGACTL---GPDYQRPDLPVASEFKQAEGWKPATPADALQRGEWWRLYGDA 74

Query: 73  DFDEVATLAVVNNPDLRIARSAASVSAAQAFAARLLPDPQVS-------------LTRDF 119
           + D + +   V+N ++  A +    + A    AR    P +S              T   
Sbjct: 75  ELDALVSRLNVSNQNIAAAEAQFRQARALVRGARSQLFPILSGSAGVSRSAQGSGSTSST 134

Query: 120 PDVTGAGITSAFVAGASYAINA---------LITHAATAEAASADARQVRGNLLWQEWQV 170
                 G+  ++ AG S +  A         L  + A  +A++AD    R +L  +  Q 
Sbjct: 135 GSTFNGGVGESYEAGLSASWEADIWGRLRRNLEANRANMQASAADLAAARLSLQAELVQT 194

Query: 171 IAQARLLFVRLDAAHQRHDLLERTRALMADRYRRTAEALAAGLLTADAVTPHLAALQDVE 230
             Q R++       HQR  LL++T    A   R T     AG++    V+     L+  +
Sbjct: 195 YLQLRVI-----DEHQR--LLDQTVEAYARSLRLTENQYRAGIVPRSDVSQAQTQLKSTQ 247

Query: 231 RQLHDLERQTNQADSDLHALLGLSPDTALRLQGRASLPAFDTESVRAHADGRLAARPDIA 290
            Q  DL+ Q  Q +  +  L+G++P + L +  R  +P      +   +   L  RPDIA
Sbjct: 248 AQAIDLKWQRAQMEHAIAVLVGVAP-SELGIAVREDIPPLPAIPLAVPSQ-LLERRPDIA 305

Query: 291 ALREGYAAQDARLRVALLGQFPALTL---GVQRSRDTSNTFTR-----GFGITLGLPILN 342
           +      A +A + VA    +P LTL   G  R+   S+ F+        G  L L +L+
Sbjct: 306 SAERQVMAANANIGVAEAAWYPELTLSASGGYRNSSFSDLFSVPNRFWSLGPQLALTLLD 365

Query: 343 --GNRGEIAVQNATRDKLRAEYQQRLNAGVTDIARITAEQAISLRQLADVEAAIVQLEG- 399
             G R E+    A+ D+  A Y+Q     V +  R   +  + LR L   E A+VQ E  
Sbjct: 366 FGGRRAELERAEASYDQTVASYRQT----VLNSFREVEDYLVQLRVLE--EEAVVQREAL 419

Query: 400 -----GVRRVRSAWQAGNADALALASAETALLAKQGERIDAMQAIQEQRVGLLTLTGG 452
                 +R + + ++AG  D L++A+ +T  L  Q   +  +       V L+   GG
Sbjct: 420 EAAQESLRLIENQYRAGTVDFLSVATVQTTALNNQRTNLTLLGDRLTASVLLIAALGG 477