Pairwise Alignments

Query, 681 a.a., VgrG protein from Variovorax sp. SCN45

Subject, 1017 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

 Score =  263 bits (672), Expect = 3e-74
 Identities = 190/636 (29%), Positives = 292/636 (45%), Gaps = 58/636 (9%)

Query: 43  FRYTLTLATPEQSGYSGRQAANVAIKQLVGEVLTVHIRLDGRPGAGGSQRHISGLVTRVR 102
           FRY + LA+           +N+  +Q V +   + I  DG+       + I+G+V ++ 
Sbjct: 42  FRYQVDLASA---------LSNLTAEQFVDQTAHLTILRDGQV-----VQQINGIVRQLS 87

Query: 103 FLRLENRRALYEAVIEPWLTLATRTNDFRIFQNQTV---LAILSQTLGKYDFPFEICASQ 159
                +R   Y   + P L   +  ++ RIFQ Q+V   ++IL Q +G  D+ F +   +
Sbjct: 88  KGDTGHRHTFYSLTLVPALERLSLRSNSRIFQQQSVPEIISILLQEMGIEDYAFAL--KR 145

Query: 160 NYPPREFQVQYGESDHDFMARLMHEWGLYYYFEHAEGAHKLVVVDDMAAHKPFANAAYET 219
               REF VQY E+D  F+ R+  E GL Y   H    H L+  D   +    A    + 
Sbjct: 146 ECAQREFCVQYRETDLQFLHRIAAEEGLVYSHLHEAQKHTLLFTDSSDSQPKLA----KP 201

Query: 220 IPFHA-AEDTVREEHCDSFNACEALQSGRWVTSDFDFTRPKADL-QQVSAMPRKTAQNTL 277
           +P++A A   +   +          Q       D+ F +P     Q+         Q   
Sbjct: 202 VPYNALAGGEINLPYVVDLQFKTTAQVSHTELKDYSFKKPAYGFTQRTQGKDIAYQQPNY 261

Query: 278 ERYGWPGDYAVESEGEQLVRTRMEEVGSQGERASGSGNLRAVVPGCLITLERHPQSESNR 337
           E +  PG Y  ++ G+   + R+E +      A    +   ++ G    L+ H     NR
Sbjct: 262 EHFDAPGRYKDDANGKAFSQIRLEYLRRDALLADAKSDEPLLLAGVRFDLQDHLDHAMNR 321

Query: 338 QYLVTDARLHMQEPG---EASGQEVFECRVDFDVISSGKVFRAPAPNAPRPRTSGPQTAI 394
            +LV  A     +P    E  G           +I +   +RA      +P+  GP  A 
Sbjct: 322 DWLVVQANHQGTQPQALQEEGGSGATTYSNQLKLIPAHITWRARP--CAKPQVDGPMIAT 379

Query: 395 VTGPAGREIWTDQYGRVKLSFHWNRYCTKDENSSCWVRVSSPWAGTNFGGIQIPRIGQEV 454
           V GP G EI+ D +GRVK+ F W+RY + +E SSCWVRV+  WAG+ +G + IPR+G EV
Sbjct: 380 VVGPQGEEIYCDNFGRVKVHFPWDRYSSSNEKSSCWVRVAQEWAGSQYGSMAIPRVGHEV 439

Query: 455 IVDFENGDPDRPIVTGRVYNADNMPPWTLPDNATQSGLLTRSSEGATDANANALRFEDKK 514
           IV F NGDPD+PI+TGR Y+A N  P+ LPD+ T++ L T + +G      N L FED+ 
Sbjct: 440 IVSFLNGDPDQPIITGRTYHATNTAPYALPDHKTKTVLRTETHQG---QGYNELSFEDQA 496

Query: 515 GQEQVWLHAERNQDIEVERDETHWVGHDRSKTIDHDETVHVKHDRTETVGHDETITIGNN 574
           G EQ+ LHA+++ D  +E D T  + HD+  T+D                        N+
Sbjct: 497 GSEQILLHAQKDWDALIEHDHTEVIRHDQHLTVD------------------------ND 532

Query: 575 RMETIKANELLTVLQNMNRFVALTSSEEVGIAKTSLVGLTQTVAVGKSKNETIGEDFSLD 634
           R   I+ N+ LTV   +   +AL SS EVG +    VG    V  GK  +   G    ++
Sbjct: 533 RFTRIQRNQHLTVEGEVRSKIALDSSHEVGASLQHKVGQRIAVEAGKEISLKSGAKIVVE 592

Query: 635 VGEKLVITVGKSRLEMTKDGQVTLTGAKFDFRATGA 670
            G +L +  G S +++   G V L G   +  A G+
Sbjct: 593 AGAELTLKAGGSFVKVDAGG-VHLVGPAINLNAGGS 627