Pairwise Alignments

Query, 681 a.a., VgrG protein from Variovorax sp. SCN45

Subject, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

 Score =  275 bits (703), Expect = 5e-78
 Identities = 187/589 (31%), Positives = 279/589 (47%), Gaps = 48/589 (8%)

Query: 92  RHISGLVTRVRFLRLENRRALYEAVIEPWLTLATRTNDFRIFQNQTV---LAILSQTLGK 148
           + + G+V       + +    Y+  + P L   +  ++ RIFQ QTV   L+IL Q +G 
Sbjct: 77  QRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGI 136

Query: 149 YDFPFEICASQNYPPREFQVQYGESDHDFMARLMHEWGLYYYFEHAEGAHKLVVVD--DM 206
           +D+ F +   ++   REF VQY ESD DF+ RL  E GL Y F H  G H L   D  D 
Sbjct: 137 HDYAFAL--KRDCVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDS 194

Query: 207 AAHKPFANAAYETIPFHA-AEDTVREEHCDSFNACEALQSGRWVTSDFDFTRPKAD-LQQ 264
            +  P      E IP++A A  T+   +          +       D+ F +P    LQ 
Sbjct: 195 LSKLP------EPIPYNALAGGTMDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQT 248

Query: 265 VSAMPRKTAQNTLERYGWPGDYAVESEGEQLVRTRMEEVGSQGERASGSGNLRAVVPGCL 324
           V        Q   + +  PG Y  +  G    + R++ +      A+G  N   +  G  
Sbjct: 249 VQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYK 308

Query: 325 ITLERHPQSESNRQYLVTDARLHMQEPG---EASGQEVFECRVDFDVISSGKVFRAPAPN 381
             L+ H     NR ++V       ++P    E  G         F +I     +RA    
Sbjct: 309 FDLQEHLDPAMNRDWVVVSINHQGEQPQALQEEGGSGATTYNNQFSLIPGHLHWRAEPQ- 367

Query: 382 APRPRTSGPQTAIVTGPAGREIWTDQYGRVKLSFHWNRYCTKDENSSCWVRVSSPWAGTN 441
            P+P+  GP  A V GP G EI+ D++GRVK+ F W+RY   +E SSCWVRVS  WAG+ 
Sbjct: 368 -PKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQ 426

Query: 442 FGGIQIPRIGQEVIVDFENGDPDRPIVTGRVYNADNMPPWTLPDNATQSGLLTRSSEGAT 501
           +G I IPRIG EVIV F NGDPD+PI+TGR Y+A N PP+TLP++ T++ L T + +G  
Sbjct: 427 YGFIAIPRIGHEVIVSFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQG-- 484

Query: 502 DANANALRFEDKKGQEQVWLHAERNQDIEVERDETHWVGHDRSKTIDHDETVHVKHDRTE 561
               N L FED+ G+EQ++LHA+++ D  +E D T  + HD+  T+++D+   +KH    
Sbjct: 485 -EGFNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDQHLTVENDQFTQIKH---- 539

Query: 562 TVGHDETITIGNNRMETIKANELLTVLQNMNRFVALTSSEEVGIAKTSLVGLTQTVAVGK 621
                               N+ LTV       V L  S E+G +    +G       G 
Sbjct: 540 --------------------NQHLTVEGESRTLVKLDCSSEIGGSLQQKIGSKAIYDAGT 579

Query: 622 SKNETIGEDFSLDVGEKLVITVGKSRLEMTKDGQVTLTGAKFDFRATGA 670
             +   G    L+ G +L I  G S +++   G V + G+  +  + G+
Sbjct: 580 EVHLKAGNKLVLEAGNELTIKAGGSFIKVDAGG-VHVVGSAINLNSGGS 627