Pairwise Alignments

Query, 681 a.a., VgrG protein from Variovorax sp. SCN45

Subject, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

 Score =  264 bits (674), Expect = 2e-74
 Identities = 188/638 (29%), Positives = 304/638 (47%), Gaps = 62/638 (9%)

Query: 43  FRYTLTLATPEQSGYSGRQAANVAIKQLVGEVLTVHIRLDGRPGAGGSQRHISGLVTRVR 102
           FRY + LA+         + +N+  +Q+V +   + +  + +       + + G+V    
Sbjct: 42  FRYEVQLAS---------RVSNLTAEQMVDKRAELKLYRNSQ-----LVQRVHGIVRAFS 87

Query: 103 FLRLENRRALYEAVIEPWLTLATRTNDFRIFQNQTV---LAILSQTLGKYDFPFEICASQ 159
              + +    Y+  + P L   +  ++ RIFQ QTV   L+IL Q +G  D+ F +   +
Sbjct: 88  QGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGINDYAFAL--KR 145

Query: 160 NYPPREFQVQYGESDHDFMARLMHEWGLYYYFEHAEGAHKLVVVD--DMAAHKPFANAAY 217
           +   REF VQY ESD DF+ RL  E GL Y F H  G H L   D  D  +  P      
Sbjct: 146 DGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSLSKLP------ 199

Query: 218 ETIPFHA-AEDTVREEHCDSFNACEALQSGRWVTSDFDFTRPKAD-LQQVSAMPRKTAQN 275
           E IP++A     +   +          +       D+ F +P    LQ V        Q 
Sbjct: 200 EPIPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQGTELDYQQT 259

Query: 276 TLERYGWPGDYAVESEGEQLVRTRMEEVGSQGERASGSGNLRAVVPGCLITLERHPQSES 335
             + +  PG Y  +  G    + R++ +      A+G  N   +  G    L+ H     
Sbjct: 260 RYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFDLQEHLDPAM 319

Query: 336 NRQYLVTDARLHMQEPG---EASGQEVFECRVDFDVISSGKVFRAPAPNAPRPRTSGPQT 392
           NR ++V       ++P    E  G         F +I     +RA     P+P+  GP  
Sbjct: 320 NRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGHLHWRAEPQ--PKPQVDGPMI 377

Query: 393 AIVTGPAGREIWTDQYGRVKLSFHWNRYCTKDENSSCWVRVSSPWAGTNFGGIQIPRIGQ 452
           A V GP G EI+ D++GRVK+ F W+RY   +E SSCWVRVS  WAG+ +G I IPRIG 
Sbjct: 378 ATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGH 437

Query: 453 EVIVDFENGDPDRPIVTGRVYNADNMPPWTLPDNATQSGLLTRSSEGATDANANALRFED 512
           EVIV+F NGDPD+PI+TGR Y+A N PP+TLP++ T++ L T + +G      N L FED
Sbjct: 438 EVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQG---EGFNELSFED 494

Query: 513 KKGQEQVWLHAERNQDIEVERDETHWVGHDRSKTIDHDETVHVKHDRTETVGHDETITIG 572
           + G+EQ++LHA+++ D  +E D T  + HD   T+++D+   +K        H++ +T+ 
Sbjct: 495 QAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIK--------HNQHLTVE 546

Query: 573 NNRMETIKANELLTVLQNMNRFVALTSSEEVGIAKTSLVGLTQTVAVGKSKNETIGEDFS 632
               E +   ++L++  +++              KT  V + +    G   +   G+   
Sbjct: 547 WESREAVTGEQVLSIEGSLH-------------VKTGKVWVNE---AGTEIHVKAGQKVV 590

Query: 633 LDVGEKLVITVGKSRLEMTKDGQVTLTGAKFDFRATGA 670
           ++ G ++ +  G S +++   G V L+GA  +  + G+
Sbjct: 591 IEAGSEITVKAGGSFVKVDPAG-VHLSGALVNLNSGGS 627