Pairwise Alignments

Query, 300 a.a., Peptide chain release factor 2 @ programmed frameshift-containing from Variovorax sp. SCN45

Subject, 362 a.a., peptide chain release factor 1 from Vibrio cholerae E7946 ATCC 55056

 Score =  191 bits (484), Expect = 3e-53
 Identities = 110/284 (38%), Positives = 168/284 (59%), Gaps = 15/284 (5%)

Query: 14  DNTELFEMSKEEGDMDGLQAIADDAAVLEADIKQLEFRRMFNNPADPLNAFVDIQAGAGG 73
           D+ E+ EM+++E        I    A +E    +L+   +  +P D  N F++I+AGAGG
Sbjct: 72  DDAEMREMAQDE--------IKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGG 123

Query: 74  TEACDWASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLRTETGV 133
            EA  +A  L R Y ++AE+KG++ ++   +  +  G K    KV GD A+G L+ E+G 
Sbjct: 124 DEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGG 183

Query: 134 HRLVRKSPFDSSGGRHTSFASIFVYPEIDDSIEIEINPSDVRTDTFRASGAGGQHINKTD 193
           HR+ R    ++ G  HTS  ++ V PEI ++   EI  SD++ DTFR+SGAGGQH+N TD
Sbjct: 184 HRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTD 243

Query: 194 SAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDSKTD-V 252
           SA+R+TH+PTGIVV+CQD RSQH N+  A   L +R+   E  KR  E   + D++ + +
Sbjct: 244 SAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE---ISDTRRNLL 300

Query: 253 GWG---HQIRSYVLDNSRIKDLRTNVEVSATQKVLDGDLDVFIE 293
           G G    +IR+Y     R+ D R N+ V    +V++GD+   I+
Sbjct: 301 GSGDRSDRIRTYNYPQGRVSDHRINLTVYRLTEVMEGDMQSLID 344