Pairwise Alignments

Query, 300 a.a., Peptide chain release factor 2 @ programmed frameshift-containing from Variovorax sp. SCN45

Subject, 360 a.a., peptide chain release factor 1 from Sinorhizobium meliloti 1021

 Score =  188 bits (478), Expect = 1e-52
 Identities = 113/294 (38%), Positives = 174/294 (59%), Gaps = 20/294 (6%)

Query: 6   DRLTNGLSDNTELFEMSKEEGDMDGLQAIADDAAVLEADIKQLEFRRMFNNPADPLNAFV 65
           DR T+   D  +L EM K E        + +    LE +I+ L   +   + AD  +A +
Sbjct: 68  DRATD--KDMRDLAEMEKPE--------VEEKIEALEQEIQILLLPK---DAADEKSAIL 114

Query: 66  DIQAGAGGTEACDWASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFG 125
           +I+AG GG+EA  +A  L R Y +YA  KG++ ++   + G+  G K     V G   F 
Sbjct: 115 EIRAGTGGSEAALFAGDLFRMYERYAASKGWRVEVLSASEGEAGGYKEIIATVSGRGVFS 174

Query: 126 LLRTETGVHRLVRKSPFDSSGGRHTSFASIFVYPEIDDSIEIEINPSDVRTDTFRASGAG 185
            L+ E+GVHR+ R    ++SG  HTS A++ V PE ++ I+I++ P D+R DT R+SGAG
Sbjct: 175 RLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEE-IDIDVRPEDIRVDTMRSSGAG 233

Query: 186 GQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKL 245
           GQH+N TDSAVR+THIPTGIVV   + +SQH NR  A + LRSRLYD  M +++ + ++ 
Sbjct: 234 GQHVNTTDSAVRITHIPTGIVVTSSE-KSQHQNRAKAMQVLRSRLYD--MERQRADSERS 290

Query: 246 EDSKTDVGWG---HQIRSYVLDNSRIKDLRTNVEVSATQKVLDGDLDVFIEASL 296
            D ++ VG G    +IR+Y     R+ D R N+ +    ++++G++D  ++A L
Sbjct: 291 ADRRSQVGSGDRSERIRTYNFPQGRLTDHRINLTLYKLDRMMEGEIDDVVDALL 344