Pairwise Alignments

Query, 300 a.a., Peptide chain release factor 2 @ programmed frameshift-containing from Variovorax sp. SCN45

Subject, 363 a.a., peptide chain release factor 1 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  203 bits (516), Expect = 5e-57
 Identities = 112/280 (40%), Positives = 169/280 (60%), Gaps = 9/280 (3%)

Query: 14  DNTELFEMSKEEGDMDGLQAIADDAAVLEADIKQLEFRRMFNNPADPLNAFVDIQAGAGG 73
           D+ E+ EM++EE     ++A   +   LEA+++ L   +   +P D  NAF++I+AGAGG
Sbjct: 72  DDAEMREMAQEE-----IKAAKVELERLEAELQILLLPK---DPNDDTNAFIEIRAGAGG 123

Query: 74  TEACDWASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLRTETGV 133
            EA  +A  L R Y +YAE   ++ +I     G+  G K   +KV G+ A+G L+ E+G 
Sbjct: 124 DEAAIFAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFESGG 183

Query: 134 HRLVRKSPFDSSGGRHTSFASIFVYPEIDDSIEIEINPSDVRTDTFRASGAGGQHINKTD 193
           HR+ R    +S G  HTS  ++ V  E+ ++  I INP+D++ DTFR+SGAGGQH+NKTD
Sbjct: 184 HRVQRVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTD 243

Query: 194 SAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDSKTDVG 253
           SA+R+THIPTGIVV+CQD RSQH NR  A   L +R+   E  KR+  ++    S    G
Sbjct: 244 SAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLVASG 303

Query: 254 -WGHQIRSYVLDNSRIKDLRTNVEVSATQKVLDGDLDVFI 292
               ++R+Y     R+ + R N+ +    +V++GDLD  +
Sbjct: 304 DRSERVRTYNFPQGRVSEHRINLTLYRLNEVMEGDLDAIL 343