Pairwise Alignments

Query, 136 a.a., DNA-binding protein HU-beta from Variovorax sp. SCN45

Subject, 90 a.a., DNA-binding protein HU-alpha from Vibrio cholerae E7946 ATCC 55056

 Score = 79.3 bits (194), Expect = 1e-20
 Identities = 40/89 (44%), Positives = 56/89 (62%)

Query: 1  LNRIELVEKIATAHNLSKAEAARVLETITSTIVAAVKKDDAVQIVGFGTFKQVARAARSG 60
          +N+ +L++ IA   +L+K +A   LE     +  A+K  D VQ++GFGTFK   R+AR+G
Sbjct: 1  MNKTQLIDFIAEKADLTKVQAKAALEATLGAVEGALKDGDQVQLIGFGTFKVNHRSARTG 60

Query: 61 FNPSAGTKIKIAAQKVPKFVPGAAFKAAV 89
           NP  G +IKIAA  VP FV G A K A+
Sbjct: 61 RNPKTGEEIKIAAANVPAFVAGKALKDAI 89