Pairwise Alignments

Query, 136 a.a., DNA-binding protein HU-beta from Variovorax sp. SCN45

Subject, 95 a.a., integration host factor, beta subunit (RefSeq) from Shewanella loihica PV-4

 Score = 59.3 bits (142), Expect = 1e-14
 Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 1/91 (1%)

Query: 1  LNRIELVEKIATAHN-LSKAEAARVLETITSTIVAAVKKDDAVQIVGFGTFKQVARAARS 59
          + + EL+EK+AT  + LS  E    ++ +   +   ++  D ++I GFG+F    RA R+
Sbjct: 1  MTKSELIEKLATRQSQLSAKEVESAIKEMLEQMATTLEGGDRIEIRGFGSFSLHYRAPRT 60

Query: 60 GFNPSAGTKIKIAAQKVPKFVPGAAFKAAVD 90
          G NP  GT +++  + VP F PG   +  VD
Sbjct: 61 GRNPKTGTSVELEGKYVPHFKPGKELRERVD 91