Pairwise Alignments

Query, 316 a.a., Surface antigen from Variovorax sp. SCN45

Subject, 324 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 10/311 (3%)

Query: 5   AVNTAAAAAEPPPIFVLNSLDASVSVINPVDWSEKQRITTGKEPHHIYMTPDEKSVIVAN 64
           AV  +A +AE   +FV N    +++V++   W        G  P  I ++PD K + V  
Sbjct: 11  AVLLSAGSAEANKVFVSNERGNNITVLDSESWEVIATFPAGNRPRGITISPDGKELYVCA 70

Query: 65  SAGDSLTFLNPRTAEVQRVVYGIIDPYQLQFSRDMKWFVTAGNRLNHVDVYRWDGKDLKL 124
           S  D++   +P T +    +    DP              A    N V V   D K  ++
Sbjct: 71  SDDDTVRVFDPETYKELHTLPSGPDPELFALDPSGNPLYIANEDDNLVTVV--DVKTRQV 128

Query: 125 AKRIATGKTPSHIWIDNTSTIAYVTMQDSDEMIAVDLPSQTVKWRTATGPMPADIFGTHN 184
              +  G  P  + +   +     T + ++    +D  +  +         P     T +
Sbjct: 129 LAEVPVGVEPEGVAVSPDAKTIINTSETTNMAHFIDASTYKIVHNVLVDQRPRYAEFTAD 188

Query: 185 DKTLLVGLTGGDGVQVFDVEGAQPKLVGKI--------PTGKGAHAFRSAGDGKTVFVSN 236
            K L V    G  V V DV  A+PK+  KI        P        ++  DG  +FV+ 
Sbjct: 189 GKKLYVSAEIGGTVSVIDVSAAEPKITKKITFEVPGVLPEWLQPVGVKATKDGSRIFVAL 248

Query: 237 RVANTISRIDLTTLKVVASYAVPGGPDCMDVSADGKTLYVTSRWAKKLTVVDLVAQKVVR 296
             AN ++ ID  T +V+  + V      M  +   + L  T+  +  ++++D+ A+KV+R
Sbjct: 249 GPANRVAVIDGKTDEVLDYFLVGQRVWQMAFTPGEEFLITTNGNSNDVSIIDVKAEKVIR 308

Query: 297 QVNVGRSPHGV 307
            V VG  P GV
Sbjct: 309 SVQVGEQPWGV 319



 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 2/169 (1%)

Query: 147 YVTMQDSDEMIAVDLPSQTVKWRTATGPMPADIFGTHNDKTLLVGLTGGDGVQVFDVEGA 206
           +V+ +  + +  +D  S  V      G  P  I  + + K L V  +  D V+VFD E  
Sbjct: 25  FVSNERGNNITVLDSESWEVIATFPAGNRPRGITISPDGKELYVCASDDDTVRVFDPETY 84

Query: 207 QPKLVGKIPTGKGAHAFRSAGDGKTVFVSNRVANTISRIDLTTLKVVASYAVPGGPDCMD 266
             K +  +P+G     F     G  ++++N   N ++ +D+ T +V+A   V   P+ + 
Sbjct: 85  --KELHTLPSGPDPELFALDPSGNPLYIANEDDNLVTVVDVKTRQVLAEVPVGVEPEGVA 142

Query: 267 VSADGKTLYVTSRWAKKLTVVDLVAQKVVRQVNVGRSPHGVWTLDHGKR 315
           VS D KT+  TS        +D    K+V  V V + P        GK+
Sbjct: 143 VSPDAKTIINTSETTNMAHFIDASTYKIVHNVLVDQRPRYAEFTADGKK 191



 Score = 26.6 bits (57), Expect = 9e-04
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 268 SADGKTLYVTSRWAKKLTVVDLVAQKVVRQVNVGRSPHGVWTLDHGK 314
           SA+   ++V++     +TV+D  + +V+     G  P G+     GK
Sbjct: 18  SAEANKVFVSNERGNNITVLDSESWEVIATFPAGNRPRGITISPDGK 64