Pairwise Alignments

Query, 359 a.a., Nitrogen regulation protein NtrB (EC 2.7.13.3) from Variovorax sp. SCN45

Subject, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score = 69.3 bits (168), Expect = 2e-16
 Identities = 71/290 (24%), Positives = 124/290 (42%), Gaps = 61/290 (21%)

Query: 110 LIIEMSPLEQQVRQDREERLIDQAQANKELIRNLAHEIKNPLGGIRGAAQLL-------- 161
           LI ++   + Q+ Q  +   I Q  A       +AHEI NP+G I    Q L        
Sbjct: 155 LIKKLEDAQGQLIQSEKMASIGQLSAG------IAHEINNPVGFITSNLQTLSDYFNSLE 208

Query: 162 -------QMEVESRD--LIEYTQVIIHEA-------DRLQTLVDRLLAPHRRPHVVGDV- 204
                  Q   +S+D  L E  Q I+ +        D  + + + L    R   +V ++ 
Sbjct: 209 KVLKSITQTIGQSKDTALNEACQKILKQGQVDFILEDTAELITESLEGSSRVMSIVKNLK 268

Query: 205 -------------NIHEVCERVRSVILAEFPRDLHIERDFDVSIPEFRGDREQLIQATLN 251
                        N+    E    +I  E   ++ +E+ +  ++P+      Q+ Q  LN
Sbjct: 269 EFSHVDRSEWSYANLENCIESTLKIINNEIKYNITLEKHYAANVPDVFCQPMQINQVLLN 328

Query: 252 IVHNAAQALAERRAAGDAQITFKTRVARQVIFNKQWYRLALELHVIDNGPGVPDTIKDRI 311
           I+ NA+ A+      G+  IT   + A             +E+H+ D G G+P+ I++RI
Sbjct: 329 ILVNASHAIK-----GEGTITITLQSAGDDF---------VEIHIRDTGCGIPEEIRERI 374

Query: 312 FYPLVSGRE--GGTGLGLTLAQTFVQQHHGVIECDSVPGR-TDFKILIPL 358
           F P  + +    GTGLGL+++   + +H+G I   S  G+ ++F I +P+
Sbjct: 375 FEPFFTTKPVGSGTGLGLSVSYGIINKHNGTISVTSEVGKGSEFTIRLPV 424