Pairwise Alignments

Query, 359 a.a., Nitrogen regulation protein NtrB (EC 2.7.13.3) from Variovorax sp. SCN45

Subject, 351 a.a., signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) from Shewanella loihica PV-4

 Score =  243 bits (621), Expect = 4e-69
 Identities = 145/346 (41%), Positives = 211/346 (60%), Gaps = 13/346 (3%)

Query: 20  LSTLIAVVNSNGSVLFANAGLEDALGT-SRRTLEGSQFGAC---FHEPQVLRTAI---DG 72
           L T + V++ +  + +AN+  E  LG  S R  E +    C     + Q+LRTAI    G
Sbjct: 10  LVTAVLVISDDLKLCYANSAAEQLLGLGSHRLTEHNLLDCCQLLSIDHQLLRTAIREHQG 69

Query: 73  ASSNDFATLRYEAFLRRVNHELMPVQVTLAQGEKKGELIIEMSPLEQQVRQDREERLIDQ 132
            + N    +  +     V+  L P++   AQ ++  + ++E+  ++QQ R  ++  L  Q
Sbjct: 70  LTVNTANLVTLDGQGHTVDMTLTPLE---AQPDQPEQGVLELRQVDQQRRIHQQLTLDAQ 126

Query: 133 AQANKELIRNLAHEIKNPLGGIRGAAQLLQMEVESRDLIEYTQVIIHEADRLQTLVDRLL 192
            QA + L+RNLAHEIKNPLGG+RGAAQLL  E+E  D  E+T +II +ADRL+ LVDRLL
Sbjct: 127 QQAAQYLVRNLAHEIKNPLGGLRGAAQLLSRELEDADQREFTDLIIEQADRLRNLVDRLL 186

Query: 193 APHRRPHVVGDVNIHEVCERVRSVILAEFPRDLHIERDFDVSIPEFRGDREQLIQATLNI 252
            P ++P      NIH V ++V  ++    P ++H+ +D+D SIP+   D+EQL QA LNI
Sbjct: 187 GP-QKPTEHSLHNIHAVIQKVLKLVSVTLPGNIHLIQDYDPSIPDIEMDQEQLQQAVLNI 245

Query: 253 VHNAAQALAERRAAGDAQITFKTRVARQVIFNKQWYRLALELHVIDNGPGVPDTIKDRIF 312
           V NA QAL      G+ +I  KTR   QV      ++L L L +ID+GPG+P  + D +F
Sbjct: 246 VQNAIQALETVEDGGEIRI--KTRTQHQVTIGTTRHKLVLALSIIDDGPGIPPELMDTLF 303

Query: 313 YPLVSGREGGTGLGLTLAQTFVQQHHGVIECDSVPGRTDFKILIPL 358
           YP+V+GRE G+GLGL++A  F + H G I+C SVPG+T+F IL+PL
Sbjct: 304 YPMVTGREQGSGLGLSIAHNFARLHGGRIDCASVPGKTEFTILLPL 349