Pairwise Alignments

Query, 261 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Variovorax sp. SCN45

Subject, 268 a.a., exodeoxyribonuclease III from Vibrio cholerae E7946 ATCC 55056

 Score =  150 bits (378), Expect = 3e-41
 Identities = 100/271 (36%), Positives = 145/271 (53%), Gaps = 26/271 (9%)

Query: 1   MKIATWNVNSLTARLQHVLDWLIANPVDVLCLQELKMTDDKFPLEVLKSAGYEAAVFGQK 60
           MK+ ++N+N L ARL  +   +  +  DV+ LQE+K+ D+ FP + +++ GY+    GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60

Query: 61  TYNGVAILSLSPMRDVVKNIGGFTDD----QSRVIAATVDTPSG-PLRVVNGYFVNG-QA 114
            + GVAIL      +V+K   GF  D    Q R+I AT    +G    ++NGYF  G   
Sbjct: 61  AHYGVAILCKQTPVEVIK---GFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQGDNV 117

Query: 115 PGSDKFEYKMKWLDALRDWLRQEMAANPNLVLLGDFNITPEDRDSFDPVGLKET------ 168
               KF YK ++   L  +LR+  + +  LV++GD NI+P D D    +G+ E       
Sbjct: 118 EHETKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLD----IGIGEANRKRWL 173

Query: 169 ----IHHTTEERNHFKALLDLGLTDSFRMFEQPEKS--FSWWDYRMLGYQKNRGLRIDHI 222
                    EER   + LLD GL D+FR    P+ S  FSW+DYR  G++ NRGLRID I
Sbjct: 174 QTGKCSFQPEEREWLQTLLDWGLVDTFRQL-HPDVSDQFSWFDYRSRGFEDNRGLRIDVI 232

Query: 223 LVSEPLVPRVKGCVVDRVPRKWEKPSDHAPV 253
           L +  L    +   +D   R  +KPSDHAP+
Sbjct: 233 LATPTLAETCQEAGIDYELRAIDKPSDHAPI 263