Pairwise Alignments

Query, 261 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Variovorax sp. SCN45

Subject, 257 a.a., exodeoxyribonuclease III protein from Sinorhizobium meliloti 1021

 Score =  165 bits (417), Expect = 1e-45
 Identities = 98/255 (38%), Positives = 137/255 (53%), Gaps = 6/255 (2%)

Query: 1   MKIATWNVNSLTARLQHVLDWLIANPVDVLCLQELKMTDDKFPLEVLKSAGYEAAVFGQK 60
           MKIAT+N+N +  RL  +L WL     DV+CLQELK TD +FP   +++AGY A   GQ 
Sbjct: 1   MKIATFNINGVNKRLDILLTWLGTAEPDVVCLQELKATDGQFPRAAIEAAGYGAVWRGQA 60

Query: 61  TYNGVAILSLS--PMRDVVKNIGGFTDDQSRVIAATVDTPSGPLRVVNGYFVNGQAPGSD 118
            +NGVAIL+    P+       G  +D QSR I A V+     + + + Y  NG      
Sbjct: 61  AWNGVAILARDREPVLTRTGLPGDSSDTQSRYIEAAVNG----ILIASLYAPNGNPQPGP 116

Query: 119 KFEYKMKWLDALRDWLRQEMAANPNLVLLGDFNITPEDRDSFDPVGLKETIHHTTEERNH 178
           KF+YK+ W           +     +VL GD+N+ PE RD +      +      E R  
Sbjct: 117 KFDYKLAWHLRFNQHAAALLETGVPVVLAGDYNVVPEPRDIYPTRSYDDNALVQPESRAA 176

Query: 179 FKALLDLGLTDSFRMFEQPEKSFSWWDYRMLGYQKNRGLRIDHILVSEPLVPRVKGCVVD 238
           F++L+D G  D+ R     E+ F++WDYR   +Q++ GLR+DHIL+S  L  R+ G  +D
Sbjct: 177 FRSLVDQGWLDALRKIHPKEELFTFWDYRRNRWQRDAGLRLDHILLSRKLRRRLTGAGID 236

Query: 239 RVPRKWEKPSDHAPV 253
           R  R  E  SDHAPV
Sbjct: 237 REIRALEGSSDHAPV 251