Pairwise Alignments

Query, 236 a.a., Oxidoreductase, short-chain dehydrogenase/reductase family from Variovorax sp. SCN45

Subject, 248 a.a., 3-oxoacyl-(acyl-carrier-protein) reductase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 94.4 bits (233), Expect = 2e-24
 Identities = 81/238 (34%), Positives = 117/238 (49%), Gaps = 22/238 (9%)

Query: 11  AVVTGSSGGIGRAIASQLLEAGWRVSGI---DLAAPTLSSHAGF-----------THTAV 56
           A+VTG+S GIGRAIA  L+EAG  V G    +  A  +  + G            + +  
Sbjct: 12  ALVTGASRGIGRAIAETLVEAGAVVIGTATSEKGAAAIQEYLGDKGFGLVLNVTDSQSVT 71

Query: 57  DLCNADAIARAAATLQDADALVHAAGVLRVGPLGALDHAGGELMWRLHVDAAARLADALV 116
           DL   D+I   A    D D LV+ AG+ R   L  +       +   ++ +  RL+  ++
Sbjct: 72  DLF--DSIKEKAG---DVDILVNNAGITRDNLLMRMKDDEWNDIIDTNLTSLFRLSKPVM 126

Query: 117 PAMAARGQGRVVFVGSRVA-QGLPGRGQYAATKAALIALARSWAAEVAPQGVTVNVVSPG 175
             M  +  GR++ +GS V   G  G+  Y+A KA LI   +S A EVA + +TVN ++PG
Sbjct: 127 RTMMKKRFGRIINIGSVVGTMGNAGQVNYSAAKAGLIGFTKSLAREVASRQITVNAIAPG 186

Query: 176 ATQTSMLQDPARAGSAPRMP--PIGRLIRPEEIAALVGFLLSPQAAAITGQDLAICGG 231
             QT M  +         M   P+ RL + +EIA  V FL S  AA ITG+ L + GG
Sbjct: 187 FIQTDMTDELTEDQQKAIMSQVPMERLGQAQEIANAVLFLASDSAAYITGETLHVNGG 244