Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 293 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 60.5 bits (145), Expect = 5e-14
 Identities = 79/307 (25%), Positives = 122/307 (39%), Gaps = 22/307 (7%)

Query: 8   LDLEWLEDFLALAETGNFSRAAQARSIAQPAFSRHIRSLEEWVGVDLFDRSAHPTALTAA 67
           + ++ L+ FL L ET NF+RAAQ   I QP  S+ I+ LEE +G  L  R+     LT A
Sbjct: 3   IPIKTLQCFLTLVETENFTRAAQKCFITQPTLSKIIQRLEESLGETLLIRNNQKVELTQA 62

Query: 68  GKRFQPLLQEVLAGLEAARIKARAAHDLDAASLSFAATHVLSLTFFPRWLGSVESRLSMG 127
           G+ F+   +E+L      +        L +  L      ++S +     L S   R    
Sbjct: 63  GQLFEHSAREILGQWHRLQEDMSNLSGLKSGRLRLGVCPMMS-SLIIGLLTSYRKRYPGV 121

Query: 128 PIQTVSDSSYACEDLMLQRRVQFVLCHGHAGAPGRLDEGQYPVQRLSEDVL---VPVSAP 184
            +Q      + CE  +L   +          A     E +   Q L++  L   +P + P
Sbjct: 122 ELQMYEYGGFGCEQALLNNSLDIAFT-----ALPTTHETELINQPLTKYPLLACLPEAHP 176

Query: 185 DAGAAPLHVLGAGQSPSVLAYSEASGLGRIMRSLQDSEFGKDFAASLSIVFTAHHAALLR 244
            A  + L        P +L Y+E   L +++  L      +     L+I F +     L 
Sbjct: 177 LAAKSYLSWQDFEPYPFIL-YNEDFSLAKLINRL-----SRKAGVQLNIAFRSGQWDFLA 230

Query: 245 TMALEGRGLAWLPMSLVADDLRGGALV---DAGAGGWRVPVDIRLYRQQAQMAPVAEALW 301
           TM     GLA LP   +   L    LV      A  W + +   ++RQ   + P A AL 
Sbjct: 231 TMVEADMGLAILP-EPICQKLSNSKLVFRPMQPALTWDLAL---IWRQNLPLTPAANALL 286

Query: 302 ALVSEGA 308
            L  + A
Sbjct: 287 ELSKQKA 293