Pairwise Alignments

Query, 233 a.a., Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 256 a.a., amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  118 bits (296), Expect = 9e-32
 Identities = 68/195 (34%), Positives = 113/195 (57%), Gaps = 10/195 (5%)

Query: 22  GLQETLKIAAGSWLLAMAMAVLLLVVRLTPNRIAERVVAGYVSYHRNVPTLVQLMFWYFG 81
           G+  T ++   S + ++ + ++  + RL+ NR    V + YV   R +P LVQL + Y+ 
Sbjct: 55  GILVTFQVTVFSIICSIPIGLITGLGRLSRNRGINLVASTYVEVVRGIPLLVQLFYIYY- 113

Query: 82  IFSVLPDALQRWLSAHNAETLLSIVALGLCQAAYFSEDMRSGLRAIPAGQAEAARALGHG 141
                  AL R+L     + L +I+AL +C  AY  E  R+G+ AIP GQ EAAR+LG  
Sbjct: 114 -------ALGRFLKV--PDMLAAIIALSVCYGAYMGEVFRAGIEAIPKGQTEAARSLGFN 164

Query: 142 YIGSMRFVMLPQAIRNAVPALVNHSVSLFKNSSLAMAIGVAELTHAVKEIESQSFRTFEA 201
            + +M  V+LPQA R  +P + N  +++ K++SL   I VA++    +E  S+SF+ FE 
Sbjct: 165 RVETMFLVVLPQAWRTILPPVGNEFIAMLKDTSLVSIIAVADILRRGREFASESFQYFET 224

Query: 202 YSVATVLYLVCSLLI 216
           Y++  ++YL+ +LL+
Sbjct: 225 YTMIALVYLLITLLL 239